Miyakogusa Predicted Gene

Lj1g3v1265870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1265870.1 Non Chatacterized Hit- tr|J3MKR0|J3MKR0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,39.31,2e-18,DnaJ molecular chaperone homology domain,Heat
shock protein DnaJ, N-terminal; seg,NULL; SUBFAMILY NO,CUFF.27050.1
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39420.1                                                       310   2e-84
Glyma09g19770.1                                                       308   4e-84
Glyma06g15480.1                                                       200   1e-51
Glyma09g19800.1                                                       154   1e-37
Glyma19g33000.1                                                        98   9e-21
Glyma02g29150.1                                                        97   2e-20
Glyma03g30120.1                                                        96   4e-20
Glyma09g17020.1                                                        50   3e-06

>Glyma04g39420.1 
          Length = 263

 Score =  310 bits (793), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 177/281 (62%), Positives = 204/281 (72%), Gaps = 22/281 (7%)

Query: 1   MQVSRWRSLLSMKTYMIPSTTQFSAAFHSTPCSCQKWNSKSNPGVKGDQQPSKNQIKFIT 60
           MQ++RW +L S+KT++I S T FS  FHSTPCSCQKWN+K N  VK  QQPSKN IKFIT
Sbjct: 1   MQLARWPNLSSLKTHVIASVTHFSQ-FHSTPCSCQKWNNKFNSDVKKGQQPSKNHIKFIT 59

Query: 61  RQKRADTKKALKHLLYSNGASKFSFEDIETKQKFEGN-SNWRGNQDGRPNSNSNKGQPXX 119
           RQKRAD KKAL  LLY+NGASKFSFE+   K  ++G  SN    + G+P S  + G    
Sbjct: 60  RQKRADAKKALNSLLYNNGASKFSFEE---KYGYQGRFSNKDQPKSGQPKSGQHSG---- 112

Query: 120 XXXXXXXXXXXXXXXXXIRREFCFFEEFDGNPEQIFHGTFGNRCFTFRNLN---GSSEHS 176
                            IRRE  F E+FDG+ EQIF  TFGN+ +T+   N    SSEHS
Sbjct: 113 -------GKPQKKSKRKIRRE-SFSEDFDGHTEQIFQATFGNKWYTWSFNNWRSSSSEHS 164

Query: 177 ASGFEWKEHSNRTNKWRTASDDESDNEDHGSCCVGSSSDRTILGLPSTGPLKIEDVKNAF 236
            SGFEW+EHSNRTNKW+  SD E +++D  SCC GSSSDRT+LGLP TGPLKIEDVKNAF
Sbjct: 165 TSGFEWREHSNRTNKWKNESDTEHEDDD--SCCEGSSSDRTVLGLPPTGPLKIEDVKNAF 222

Query: 237 RLSALKWHPDKHQGSSQAMAEEKFKLCVNAYKTLCNALSPA 277
           RLSALKWHPDKHQG SQAMAEEKFKLCVNAYKTLCNAL+P+
Sbjct: 223 RLSALKWHPDKHQGPSQAMAEEKFKLCVNAYKTLCNALAPS 263


>Glyma09g19770.1 
          Length = 262

 Score =  308 bits (790), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 178/283 (62%), Positives = 204/283 (72%), Gaps = 27/283 (9%)

Query: 1   MQVSRWRSLLSMKTYMIPSTTQFS---AAFHSTPCSCQKWNSKSNPGVKGDQQPSKNQIK 57
           MQ++RWR+LLS KT+ IPS   FS   + FHSTP SCQKWN+K N  VK  QQPSKN IK
Sbjct: 1   MQLARWRNLLSPKTHAIPSLMHFSEFHSEFHSTPYSCQKWNNKFNSDVKKCQQPSKNHIK 60

Query: 58  FITRQKRADTKKALKHLLYSNGASKFSFEDIETKQKFEGNSNWRGNQDGRPNSNSNKGQP 117
           FITRQKRAD KKAL  LLY+NGASKFSFE+   K  ++G    R +  G+P S  + G  
Sbjct: 61  FITRQKRADAKKALNSLLYNNGASKFSFEE---KCGYQG----RFSNKGQPKSGQHSG-- 111

Query: 118 XXXXXXXXXXXXXXXXXXXIRREFCFFEEFDGNPEQIFHGTFGNRCFTFRNLN---GSSE 174
                              IRRE CF E+FDG+ EQIF  TFGN+ +T+   N    SSE
Sbjct: 112 ---------GKPQKKSKRKIRRE-CFSEDFDGHTEQIFQATFGNKWYTWSFNNWSSSSSE 161

Query: 175 HSASGFEWKEHSNRTNKWRTASDDESDNEDHGSCCVGSSSDRTILGLPSTGPLKIEDVKN 234
           HS SGFEW+EHSNRT+KW+  SD E +++D  SCC GSSSDRT+LGLP TGPLKIEDVKN
Sbjct: 162 HSTSGFEWREHSNRTSKWKNESDTEHEDDD--SCCEGSSSDRTVLGLPPTGPLKIEDVKN 219

Query: 235 AFRLSALKWHPDKHQGSSQAMAEEKFKLCVNAYKTLCNALSPA 277
           AFRLSALKWHPDKHQG SQAMAEEKFKLCVNAYKTLCNALSP+
Sbjct: 220 AFRLSALKWHPDKHQGPSQAMAEEKFKLCVNAYKTLCNALSPS 262


>Glyma06g15480.1 
          Length = 170

 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 114/135 (84%), Gaps = 5/135 (3%)

Query: 146 EFDGNPEQIFHGTFGNRCFT--FRNLNG-SSEHSASGFEWKEHSNRTNKWRTASDDESDN 202
           +FDG+PEQIF  TFGN+ +T  F N +G SSEHS SGFEW+EHSNRTNKW+  SD E  +
Sbjct: 38  DFDGHPEQIFQATFGNKWYTWSFNNWSGFSSEHSTSGFEWREHSNRTNKWKNESDIE--H 95

Query: 203 EDHGSCCVGSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKL 262
           +D    CVGS SDRT+LGLP TGPLKIEDVKNAF+LSALKWHPDKHQG SQAMAEEKFKL
Sbjct: 96  DDDDDSCVGSCSDRTVLGLPPTGPLKIEDVKNAFQLSALKWHPDKHQGPSQAMAEEKFKL 155

Query: 263 CVNAYKTLCNALSPA 277
           CVNAYKTLCNALSP+
Sbjct: 156 CVNAYKTLCNALSPS 170


>Glyma09g19800.1 
          Length = 125

 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/115 (71%), Positives = 94/115 (81%), Gaps = 5/115 (4%)

Query: 152 EQIFHGTFGNRCFTFRNLN---GSSEHSASGFEWKEHSNRTNKWRTASDDESDNEDHGSC 208
           +++ H TFGN+ +T+   N    SSEHS SGFEW+EHSNRTNKW+  SD E +++D  SC
Sbjct: 13  KKLAHATFGNKWYTWSFNNWRSSSSEHSTSGFEWREHSNRTNKWKNESDTEHEDDD--SC 70

Query: 209 CVGSSSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLC 263
           C GSSSDRT+LGLP TGPLKIEDVKNA RLSALKWHPDKHQG SQAMAEEKFKLC
Sbjct: 71  CEGSSSDRTVLGLPPTGPLKIEDVKNAIRLSALKWHPDKHQGPSQAMAEEKFKLC 125


>Glyma19g33000.1 
          Length = 254

 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 54/62 (87%)

Query: 214 SDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCVNAYKTLCNA 273
           SDR  LGL ++G LK+EDVKNA+R+ ALKWHPD+HQGSS+A+AEEKFKLC  AY++LC+ 
Sbjct: 191 SDRLALGLSASGSLKLEDVKNAYRVCALKWHPDRHQGSSKAIAEEKFKLCSAAYQSLCDK 250

Query: 274 LS 275
           L+
Sbjct: 251 LA 252


>Glyma02g29150.1 
          Length = 241

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 7/139 (5%)

Query: 140 EFCFFEEFDGNPEQIFHGTFG-NRCFTFRNLNGSSEHSASGFEWKEHSNRTNKWRTASDD 198
           EFC   + D + E +F   FG NR F +  +N  +        +  H    N WR  S++
Sbjct: 105 EFC---KDDFDVETVFRSAFGGNRSFYWSFINEENPQWRKSGGFSNHGKSWN-WRRWSEN 160

Query: 199 ESDNEDHGSCCVGSS--SDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQAMA 256
             +     S C  S   SDR  LG+ ++GPLK+EDVKNA+R+ ALKWHPD+H GS + +A
Sbjct: 161 GYNGTSTESDCSQSDLISDRLALGMSASGPLKLEDVKNAYRICALKWHPDRHDGSFKVIA 220

Query: 257 EEKFKLCVNAYKTLCNALS 275
           EEKFK C  AY++LC+ L+
Sbjct: 221 EEKFKHCSAAYQSLCDKLA 239


>Glyma03g30120.1 
          Length = 106

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 54/62 (87%)

Query: 214 SDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCVNAYKTLCNA 273
           SDR  LGL  +GPLK+EDVKNA+R  ALKWHPD+HQGSS+A+AEEKF+LC  AY++LC++
Sbjct: 43  SDRLALGLSVSGPLKLEDVKNAYRPCALKWHPDRHQGSSKAVAEEKFELCSAAYQSLCDS 102

Query: 274 LS 275
           L+
Sbjct: 103 LA 104


>Glyma09g17020.1 
          Length = 190

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 20/141 (14%)

Query: 140 EFCFFEEFDGNPEQIFHGTFG-NRCFTFRNLNGSSEHSASGFEWKEHSNRTNKWRTASDD 198
           EFC   + D + E +F   FG NR + +  +N  +    SG  +  H    N WR  S++
Sbjct: 63  EFC---KDDFDVETVFWSVFGGNRSYYWSFINEENPQWRSG-GFSNHEKSWN-WRRRSEN 117

Query: 199 E---SDNEDHGSCCVGS-SSDRTILGLPSTGPLKIEDVKNAFRLSALKWHPDKHQGSSQA 254
           E   +  E    C      SDR  LGL ++GPLK+EDVKN  ++S +           + 
Sbjct: 118 EYNGTSTEPESDCSHSDLISDRLALGLGASGPLKLEDVKNV-QVSDM---------CLKV 167

Query: 255 MAEEKFKLCVNAYKTLCNALS 275
           +AEEK K C  AY+ L + L+
Sbjct: 168 IAEEKLKHCSAAYRPLSDKLA 188