Miyakogusa Predicted Gene

Lj1g3v1244800.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1244800.3 tr|E9C573|E9C573_CAPO3 Gnl3l protein
OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_03141
PE=4,39.34,2e-19,GTP-BINDING PROTEIN-PLANT,NULL; GTP-BINDING
PROTEIN-RELATED,NULL; coiled-coil,NULL; GN3L_Grn1,Guanin,CUFF.27075.3
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g17960.1                                                       151   3e-37
Glyma10g24060.1                                                       151   3e-37

>Glyma20g17960.1 
          Length = 574

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/130 (63%), Positives = 88/130 (67%), Gaps = 4/130 (3%)

Query: 39  LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQXXXXXXXXXXXXXLGLQE 98
           L L+GKKKVEKDPGIPNDWPFKEQELKALE      I+ELEQ             LGL E
Sbjct: 39  LRLSGKKKVEKDPGIPNDWPFKEQELKALEARRAKAIEELEQKKAERKERARKRKLGLLE 98

Query: 99  XXXXXXXXX----XXXXXFATVGKTRDTSDRAFYKDLVKVIEASDVLLEVLDARDPLCSR 154
                             FATVGKTRD+SDRAFYKDLVKVIEASDVLLEVLDARDPL +R
Sbjct: 99  DEDNSKLSDMDILKESNDFATVGKTRDSSDRAFYKDLVKVIEASDVLLEVLDARDPLGTR 158

Query: 155 FIDIENMVMK 164
            +DIE MVMK
Sbjct: 159 CVDIEKMVMK 168


>Glyma10g24060.1 
          Length = 572

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/126 (63%), Positives = 87/126 (69%)

Query: 39  LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQXXXXXXXXXXXXXLGLQE 98
           L L+GKKKVEKDPGIPNDWPFKEQELKALE      I+ELEQ             LGL E
Sbjct: 39  LRLSGKKKVEKDPGIPNDWPFKEQELKALEARRAKAIEELEQKKAERKERARKRKLGLLE 98

Query: 99  XXXXXXXXXXXXXXFATVGKTRDTSDRAFYKDLVKVIEASDVLLEVLDARDPLCSRFIDI 158
                          +TVGKT+D+SDRAFYKDLVKVIEASDVLLEVLDARDPL +R +DI
Sbjct: 99  DEDNSKLSEMNTLKGSTVGKTKDSSDRAFYKDLVKVIEASDVLLEVLDARDPLGTRCVDI 158

Query: 159 ENMVMK 164
           E MVMK
Sbjct: 159 EKMVMK 164