Miyakogusa Predicted Gene

Lj1g3v1219090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1219090.1 Non Chatacterized Hit- tr|G3TBZ3|G3TBZ3_LOXAF
Uncharacterized protein OS=Loxodonta africana
GN=PDCD2,27.27,2e-18,seg,NULL; PDCD2_C,Programmed cell death protein
2, C-terminal; PCDC2-RELATED,NULL; PCDC2 (PROGRAMMED,CUFF.26999.1
         (366 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39660.1                                                       390   e-108
Glyma06g15210.1                                                       223   3e-58

>Glyma04g39660.1 
          Length = 369

 Score =  390 bits (1002), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/369 (60%), Positives = 251/369 (68%), Gaps = 17/369 (4%)

Query: 2   GGAVLLGMPGPWADDYREPSDPYTTKIGGLPDWPIPINGDLLRCGGCDCTLCLVAQVYAP 61
             A LLGMPGPWA DY EPSDPYTTKIGGLPDWP+PIN DLLRC  C   LCLVAQVYAP
Sbjct: 5   ASATLLGMPGPWAYDYHEPSDPYTTKIGGLPDWPLPINTDLLRCAECTGQLCLVAQVYAP 64

Query: 62  LPSSQHRALFVLGCLSPKCGTRWRVFRVQKNGD-DVESFKHS----EVQLQNAELCEDVD 116
           L  S HR LFVLGC+SP CGT WRV R+Q   D D    KH+    EV +      +D D
Sbjct: 65  L--SHHRTLFVLGCVSPNCGTAWRVLRLQNVADVDTSQQKHAASVAEVPIATVSD-DDDD 121

Query: 117 EDEGEMDLAQLGKALFEAGTLAASNXXXXXXXXXXXXXXXXXXXXXXXXXXXLVCDDNHI 176
           +D  +MD  QLGKALFEAGTLA++                                    
Sbjct: 122 DDAIDMDFEQLGKALFEAGTLASNTKRKKPRKKCQNKLPSSSPHPKTTTTIV------QN 175

Query: 177 DMPVVPCFYMYTQEEPSTGDLSSICSNYASLSIKENKSDVEDH--SEPEESWEKERYEYD 234
           D+PVVPCFY+Y QEE S GD+SS+CS+Y+SLSIK N SDVED   S+ EE+WEKE+YEYD
Sbjct: 176 DVPVVPCFYIYAQEEQSLGDISSVCSSYSSLSIKGNGSDVEDPDPSQAEETWEKEQYEYD 235

Query: 235 KALTADRTYLKFKKRLDAYPEQCFRYAYGGKPILAAADEINPGSCTLCGRPRQFEMQLMP 294
           KAL ADRTYLKFKKRLDAYPEQCFRY+YGG+PILAAAD+INPGSC+LCGRP QFEMQLMP
Sbjct: 236 KALNADRTYLKFKKRLDAYPEQCFRYSYGGRPILAAADKINPGSCSLCGRPMQFEMQLMP 295

Query: 295 PLLYFLQEAVDEDQRQMLENWDWMTLIVYXXXXXXXXXXXLAKSNSKGWIXXXXXXXXXX 354
           PLLYFLQEA+  DQR+M+E WDWMTLIVY            AKSN+KGWI          
Sbjct: 296 PLLYFLQEALG-DQRKMVEKWDWMTLIVYTCSESCCEGIEQAKSNNKGWIIAEEAVVAQC 354

Query: 355 XXSLPIQLG 363
              L +QLG
Sbjct: 355 EEPLAVQLG 363


>Glyma06g15210.1 
          Length = 371

 Score =  223 bits (568), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/327 (45%), Positives = 190/327 (58%), Gaps = 23/327 (7%)

Query: 24  YTTKIGGLPDWPIPINGDLLRCGGCDCTLCLVAQVYAPLPSSQHRALFVLGCLSPKCGTR 83
           YTT    L DWP+PIN +LLRC  C     L   + +    + H  + +LG  S      
Sbjct: 36  YTTN-SSLFDWPLPINANLLRCAACLHPPFLTTAL-SSFSVASHPIVELLGAFSD----- 88

Query: 84  WRVFRVQKNGDDVESFKHSEVQLQNAEL--CEDVDEDEGEMDLAQLGKALFEAG----TL 137
              FR       +   K++  +L N +L  C  +   E         +   + G    TL
Sbjct: 89  ---FRTLLTWTPLG--KNNPHRLVNFQLPPCRTMTTTEATWISNNSVRHSLKLGPWLPTL 143

Query: 138 AASNXXXXXXXXXXXXXXXXXXXXXXXXXXXLVCDDNHIDMPVVPCFYMYTQEEPSTGDL 197
           +A N                           L+   + + M +VPCFY+Y QEE S+GDL
Sbjct: 144 SARNREKNARTSSLRLLQIQKQQPWFKMMCLLLI--SAMLMFLVPCFYIYAQEEQSSGDL 201

Query: 198 SSICSNYASLSIKENKSDVE--DHSEPEESWEKERYEYDKALTADRTYLKFKKRLDAYPE 255
           SS+CS+Y+SLSIK N SDV+  D S+ EE+ EKE+YEYDKAL ADRTYLKFKKRLDAYPE
Sbjct: 202 SSVCSSYSSLSIKGNGSDVDNADPSQAEETLEKEQYEYDKALNADRTYLKFKKRLDAYPE 261

Query: 256 QCFRYAYGGKPILAAADEINPGSCTLCGRPRQFEMQLMPPLLYFLQEAVDEDQRQMLENW 315
           QC+RY+YGG+PILAAAD++NPGSC LCGRPRQFEMQLM PLLYFLQEA+  DQR+++  W
Sbjct: 262 QCYRYSYGGRPILAAADKMNPGSCDLCGRPRQFEMQLMLPLLYFLQEALG-DQRKIVGKW 320

Query: 316 DWMTLIVYXXXXXXXXXXXLAKSNSKG 342
           DWMTLI+Y            AKSN+K 
Sbjct: 321 DWMTLIIYTCSESCCEGIEQAKSNNKA 347