Miyakogusa Predicted Gene

Lj1g3v1219020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1219020.1 Non Chatacterized Hit- tr|I3SBT6|I3SBT6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,68.06,2e-19,AvrRpt-cleavage,Pathogenic type III effector avirulence
factor Avr cleavage site; seg,NULL,CUFF.26997.1
         (102 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g15190.1                                                       161   1e-40
Glyma04g39680.1                                                       153   4e-38
Glyma05g31770.2                                                       152   6e-38
Glyma08g15010.1                                                       150   2e-37
Glyma05g31770.1                                                       127   2e-30
Glyma04g39680.2                                                       125   8e-30
Glyma08g15010.2                                                       125   1e-29
Glyma14g11640.1                                                       106   6e-24
Glyma06g15190.2                                                        86   1e-17
Glyma02g44700.1                                                        55   1e-08
Glyma15g06090.1                                                        51   3e-07

>Glyma06g15190.1 
          Length = 102

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 74/102 (72%), Positives = 82/102 (80%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           M+QSKEKNAPWLSVPQFGDWDQKG +PDYS+DFSKIREMRKQNKTNISRASLGN      
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKTNISRASLGNEEELMA 60

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVKA 102
                  +T H++  QH +YHQ NSPTTRRSF SYFNCC+KA
Sbjct: 61  SSATNNTSTVHSDDHQHPHYHQTNSPTTRRSFLSYFNCCIKA 102


>Glyma04g39680.1 
          Length = 101

 Score =  153 bits (387), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/102 (71%), Positives = 81/102 (79%), Gaps = 1/102 (0%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           M+QSKEKNAPWLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 1   MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGN-EEELT 59

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVKA 102
                  NT H++  QH +Y+Q NSPT+RRSF SYFNCCVKA
Sbjct: 60  ASATNNANTVHSDEHQHPHYNQTNSPTSRRSFLSYFNCCVKA 101


>Glyma05g31770.2 
          Length = 102

 Score =  152 bits (385), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 77/102 (75%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           MD+ KEKN PWLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 1   MDRRKEKNGPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMD 60

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVKA 102
                 +NTGH+      +YHQ NSPT R+SF SYFNCCVKA
Sbjct: 61  STTSSSVNTGHSSEHPQPHYHQTNSPTARKSFLSYFNCCVKA 102


>Glyma08g15010.1 
          Length = 102

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 77/102 (75%)

Query: 1   MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
           MD+ KEKNAPWLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 1   MDRRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMD 60

Query: 61  XXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVKA 102
                 +NT H+      +YHQ +SPT R+SF SYFNCCVKA
Sbjct: 61  STTSSSVNTAHSSEHPQPHYHQTHSPTARKSFLSYFNCCVKA 102


>Glyma05g31770.1 
          Length = 129

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 65/89 (73%)

Query: 1  MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
          MD+ KEKN PWLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 1  MDRRKEKNGPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMD 60

Query: 61 XXXXXXINTGHTEPQQHSNYHQANSPTTR 89
                +NTGH+      +YHQ NSPT R
Sbjct: 61 STTSSSVNTGHSSEHPQPHYHQTNSPTVR 89


>Glyma04g39680.2 
          Length = 100

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 68/89 (76%), Gaps = 1/89 (1%)

Query: 1  MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
          M+QSKEKNAPWLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 1  MEQSKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEELTA 60

Query: 61 XXXXXXINTGHTEPQQHSNYHQANSPTTR 89
                 NT H++  QH +Y+Q NSPT R
Sbjct: 61 SATNNA-NTVHSDEHQHPHYNQTNSPTVR 88


>Glyma08g15010.2 
          Length = 96

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/89 (65%), Positives = 65/89 (73%)

Query: 1  MDQSKEKNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXX 60
          MD+ KEKNAPWLSVPQFGDWDQKG +PDYS+DFSKIRE RKQNKTNISRASLGN      
Sbjct: 1  MDRRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMD 60

Query: 61 XXXXXXINTGHTEPQQHSNYHQANSPTTR 89
                +NT H+      +YHQ +SPT R
Sbjct: 61 STTSSSVNTAHSSEHPQPHYHQTHSPTVR 89


>Glyma14g11640.1 
          Length = 93

 Score =  106 bits (264), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 59/90 (65%)

Query: 7  KNAPWLSVPQFGDWDQKGPLPDYSMDFSKIREMRKQNKTNISRASLGNXXXXXXXXXXXX 66
          KN  WL VPQF DWDQKG +PDYS DFSKIREMRKQN TNISRASLGN            
Sbjct: 4  KNTTWLLVPQFRDWDQKGQVPDYSFDFSKIREMRKQNNTNISRASLGNEEKLMASSTTSN 63

Query: 67 INTGHTEPQQHSNYHQANSPTTRRSFFSYF 96
           +T H++  QH  YHQ NSPT R   F ++
Sbjct: 64 TSTIHSDDHQHPYYHQTNSPTIRSLSFLFY 93


>Glyma06g15190.2 
          Length = 64

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 45/64 (70%)

Query: 39  MRKQNKTNISRASLGNXXXXXXXXXXXXINTGHTEPQQHSNYHQANSPTTRRSFFSYFNC 98
           MRKQNKTNISRASLGN             +T H++  QH +YHQ NSPTTRRSF SYFNC
Sbjct: 1   MRKQNKTNISRASLGNEEELMASSATNNTSTVHSDDHQHPHYHQTNSPTTRRSFLSYFNC 60

Query: 99  CVKA 102
           C+KA
Sbjct: 61  CIKA 64


>Glyma02g44700.1 
          Length = 105

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 5/96 (5%)

Query: 10  PWLSVPQFGDWDQKGP-LPDYSMDFSKIREMRKQNKTN---ISRASLGNXXXXXXXXXXX 65
           P +SVPQFG WDQ  P   DY++ F++ RE +K  K N   I R S G+           
Sbjct: 5   PVMSVPQFGGWDQNEPGAIDYTVMFTQARENKKHQKANLIEIRRKSFGSERDFVNSNHGR 64

Query: 66  XINTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVK 101
                H     HS+ H+ +    ++   +Y NCC++
Sbjct: 65  A-PRHHVRSHTHSHAHEDHVVMGKKRILTYINCCIR 99


>Glyma15g06090.1 
          Length = 98

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 12  LSVPQFGDWDQKGP-LPDYSMDFSKIREMRKQNKTNISRA---SLGNXXXXXXXXXXXXI 67
           +SVPQFG WDQK P   DYSM F++ R  +KQ KTN++     SLGN             
Sbjct: 6   MSVPQFGGWDQKAPGATDYSMVFTQARANKKQQKTNLTEIKHRSLGNERDIANAKHGKAH 65

Query: 68  NTGHTEPQQHSNYHQANSPTTRRSFFSYFNCCVK 101
           +  H     HS+ H+      ++   +Y NCC++
Sbjct: 66  HHHHV--HGHSHAHEEPLVVGKKKILTYVNCCIR 97