Miyakogusa Predicted Gene
- Lj1g3v1219010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1219010.1 Non Chatacterized Hit- tr|I1JY81|I1JY81_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4107 PE=,95.92,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; TGS-like,TGS-like;
small_GTP: small GTP-b,CUFF.26998.1
(368 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g39690.1 659 0.0
Glyma06g15180.2 658 0.0
Glyma06g15180.1 627 e-180
Glyma07g04170.1 387 e-107
Glyma16g00880.1 385 e-107
Glyma13g28800.1 67 2e-11
Glyma15g10260.1 67 3e-11
Glyma14g07630.1 61 2e-09
Glyma17g37330.1 60 5e-09
Glyma01g35080.1 55 2e-07
Glyma17g29410.1 50 3e-06
>Glyma04g39690.1
Length = 368
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/368 (88%), Positives = 332/368 (90%)
Query: 1 MATVMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVT 60
MATVMQKIKDIEDEMAKTQKN P++K FDVT
Sbjct: 1 MATVMQKIKDIEDEMAKTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVT 60
Query: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
Query: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
Query: 181 FRKKEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVY 240
FRKK+KGG+N TST T+LDL+TVKAICSEY+IHNADITLRYDATADDLIDVIEGSRVY
Sbjct: 181 FRKKDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240
Query: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKG 300
IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYL+LTRIYTKPKG
Sbjct: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLNLTRIYTKPKG 300
Query: 301 MNPDYEDPVILSSKKRTVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360
MNPDYEDPVILSSKKRTVEDFC RIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED
Sbjct: 301 MNPDYEDPVILSSKKRTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360
Query: 361 VVQIIKKV 368
VVQIIKKV
Sbjct: 361 VVQIIKKV 368
>Glyma06g15180.2
Length = 368
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/368 (87%), Positives = 331/368 (89%)
Query: 1 MATVMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVT 60
MATVMQKIKDIEDEMA+TQKN P++K FDVT
Sbjct: 1 MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVT 60
Query: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
Query: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
Query: 181 FRKKEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVY 240
FRKK+KGG+N TST T+LDL+TVKAICSEY+IHNADITLRYDATADDLIDVIEGSRVY
Sbjct: 181 FRKKDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240
Query: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKG 300
IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYL LTRIYTKPKG
Sbjct: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLDLTRIYTKPKG 300
Query: 301 MNPDYEDPVILSSKKRTVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360
MNPDYEDPVILSSKKRTVEDFC RIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED
Sbjct: 301 MNPDYEDPVILSSKKRTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDED 360
Query: 361 VVQIIKKV 368
VVQIIKKV
Sbjct: 361 VVQIIKKV 368
>Glyma06g15180.1
Length = 379
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 307/352 (87%), Positives = 315/352 (89%)
Query: 1 MATVMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVT 60
MATVMQKIKDIEDEMA+TQKN P++K FDVT
Sbjct: 1 MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVT 60
Query: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG
Sbjct: 61 KSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPG 120
Query: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT
Sbjct: 121 IIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLT 180
Query: 181 FRKKEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVY 240
FRKK+KGG+N TST T+LDL+TVKAICSEY+IHNADITLRYDATADDLIDVIEGSRVY
Sbjct: 181 FRKKDKGGLNLTSTVTTTHLDLETVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVY 240
Query: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKG 300
IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYL LTRIYTKPKG
Sbjct: 241 IPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLDLTRIYTKPKG 300
Query: 301 MNPDYEDPVILSSKKRTVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGK 352
MNPDYEDPVILSSKKRTVEDFC RIHKDMLKQFKYALVWGSSAKHKPQRVGK
Sbjct: 301 MNPDYEDPVILSSKKRTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGK 352
>Glyma07g04170.1
Length = 399
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/366 (53%), Positives = 251/366 (68%), Gaps = 3/366 (0%)
Query: 4 VMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVTKSG 63
+++KIK+IE EMA+TQKN P K F+VTK G
Sbjct: 3 IIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPP-KGSSGGGEGFEVTKFG 61
Query: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 62 HGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
Query: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLNK PP + F+K
Sbjct: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKK 181
Query: 184 KEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVYIPC 243
K+ GGI+F ST T++D I EYKIHNA+I R DAT DDLIDVIEG+R Y+ C
Sbjct: 182 KKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKC 241
Query: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKGMNP 303
+YV NKID I +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 242 VYVYNKIDVIGIDDVDRLARQPNSVVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQP 301
Query: 304 DYEDPVILSSKKR--TVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361
D+ DPV+LS+ + TVEDFC IH+ ++K KY LVWG+SA+H PQ G H L DEDV
Sbjct: 302 DFGDPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHNLHDEDV 361
Query: 362 VQIIKK 367
VQI+KK
Sbjct: 362 VQIVKK 367
>Glyma16g00880.1
Length = 399
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/366 (53%), Positives = 250/366 (68%), Gaps = 3/366 (0%)
Query: 4 VMQKIKDIEDEMAKTQKNXXXXXXXXXXXXXXXXXXXXXXXPTTKXXXXXXXXFDVTKSG 63
+++KIK+IE EMA+TQKN P K F+VTK G
Sbjct: 3 IIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPP-KGSSGGGEGFEVTKFG 61
Query: 64 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123
RV L+GFPSVGKSTLL LTGT SE ASYEFTTLTCIPG+I Y KIQLLDLPGIIE
Sbjct: 62 HGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
Query: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
GA +GKGRGRQVI+ A++ + +L+VLDA K H++++ KELE G+RLNK PP + F+K
Sbjct: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKK 181
Query: 184 KEKGGINFTSTAANTNLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVYIPC 243
K+ GGI+F ST T++D I EYKIHNA+I R DAT DDLIDVIEG+R Y+ C
Sbjct: 182 KKTGGISFNSTLPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKC 241
Query: 244 IYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLSLTRIYTKPKGMNP 303
+YV NKID I +++++ L + P+ IS +L+ NLD LL ++W+ + L R+YTKP+G P
Sbjct: 242 VYVYNKIDVIGIDDVDRLARQPNSVVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQP 301
Query: 304 DYEDPVILSSKKR--TVEDFCTRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361
D+ DPV+LS+ + TVEDFC IH+ ++K KY LVWG SA+H PQ G H L DEDV
Sbjct: 302 DFGDPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGISARHYPQHCGLSHNLRDEDV 361
Query: 362 VQIIKK 367
VQI+KK
Sbjct: 362 VQIVKK 367
>Glyma13g28800.1
Length = 595
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITY-RGAKIQLLDLPGIIEGA 125
VG+VG P+ GKSTLL+ ++ VA+Y FTTL GV+++ + + + DLPG++EGA
Sbjct: 298 VGIVGAPNAGKSTLLSVVSAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 357
Query: 126 KDGKGRGRQVISTARTCNCILIVLD--AIKPITHKRLIEKELEGFGIRLNKEPPNLTFRK 183
G G G + + C+ ++ V+D + +P + EL+ F L ++P + F K
Sbjct: 358 HRGFGLGHEFLRHTERCSALVHVVDGSSQQPDLEFDAVRLELKLFNPELAEKPYVVAFNK 417
>Glyma15g10260.1
Length = 440
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITY-RGAKIQLLDLPGIIEGA 125
VG+VG P+ GKSTLL+ + VA+Y FTTL GV+++ + + + DLPG++EGA
Sbjct: 161 VGIVGAPNAGKSTLLSVVCAAKPAVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 220
Query: 126 KDGKGRGRQVISTARTCNCILIVLDAIKPITHKRL--IEKELEGFGIRLNKEPPNLTFRK 183
G G G + + C ++ V+D P+ + EL+ F +L ++P + F K
Sbjct: 221 HRGFGLGHEFLRHTERCASLVHVVDVSSPLPDLEFDAVCLELKLFNPKLAEKPYVVAFNK 280
>Glyma14g07630.1
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQLL 116
+GL+G P+ GKSTLL +T ++A Y FTTL +P + G ++ L
Sbjct: 100 IGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEATLA 157
Query: 117 DLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAI--KPITHKRLIEKELEGF 168
DLPG+IEGA GKG GR + R ++ V+DA PI R + +EL +
Sbjct: 158 DLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMY 211
>Glyma17g37330.1
Length = 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQLL 116
VGL+G P+ GKSTLL +T ++A Y FTTL +P + G ++ L
Sbjct: 103 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEATLA 160
Query: 117 DLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAI--KPITHKRLIEKELEGF 168
DLPG+IEGA GKG GR + R ++ V+DA PI R + +EL +
Sbjct: 161 DLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMY 214
>Glyma01g35080.1
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 67 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAK 126
V VG P+ GKSTLL ++ V Y FTTL G + Y I + D+PG+I+GA
Sbjct: 134 VSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGNLNYDDLSITVADIPGLIKGAH 193
Query: 127 DGKGRGRQVISTARTCNCILIVLD---------AIKPITHKRLIEKELEGFGIRLNKEPP 177
+G G + + V+D I P R + ELE L+K P
Sbjct: 194 QNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRDLILELEYHQDGLSKRPS 253
Query: 178 NLTFRKKEKGG 188
+ K ++ G
Sbjct: 254 LIVANKTDEEG 264
>Glyma17g29410.1
Length = 103
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 71 GFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVI--------TYRGAKIQLLDLPGII 122
G P+ GKSTLL +T ++A Y FTTL G + ++ L DL G+I
Sbjct: 1 GLPNAGKSTLLAAITLAKPDIADYPFTTLMLNLGRLGGDPSFGAGMYSSEATLADLHGLI 60
Query: 123 EGAKDGKGRGRQVISTARTCNCILIVLDAI--KPITHKRLIEK 163
EGA GKG GR R ++ V+DA PI R + +
Sbjct: 61 EGAHLGKGLGRDFFRHLRRTRLLVHVVDAATENPINDYRPVRE 103