Miyakogusa Predicted Gene

Lj1g3v1182090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1182090.1 tr|Q56VR0|Q56VR0_LOTJA Superoxide dismutase
OS=Lotus japonicus GN=sodA PE=3 SV=1,99.19,0,SOD_MN,Manganese/iron
superoxide dismutase, binding site; seg,NULL; SUPEROXIDE DISMUTASE
[MN],NULL; ,CUFF.27026.1
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14960.1                                                       412   e-115
Glyma04g39930.1                                                       411   e-115
Glyma04g39930.2                                                       272   3e-73
Glyma02g09630.2                                                       106   3e-23
Glyma02g09630.1                                                       105   3e-23
Glyma20g12510.1                                                       105   6e-23
Glyma10g22680.1                                                       103   2e-22
Glyma10g33710.1                                                        97   2e-20
Glyma20g33880.1                                                        80   2e-15
Glyma10g33710.2                                                        58   9e-09

>Glyma06g14960.1 
          Length = 241

 Score =  412 bits (1059), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/245 (83%), Positives = 212/245 (86%), Gaps = 4/245 (1%)

Query: 1   MAVRTLLSRKTLASVLLRNDIXXXXXXXXXXXXXXQTHSRGIHALTLPDLGYDYGALEPV 60
           MA R LL+RKTLA+VL RND                THSRG+H  TLPDL YDYGALEP 
Sbjct: 1   MAARALLTRKTLATVL-RND---AKPIIGVGITAAATHSRGLHVYTLPDLDYDYGALEPA 56

Query: 61  ISGEIMQIHHQKHHQTYITNYNKALEQLQDAIAKSDSSAVVKLQSAIKFNGGGHVNHSIF 120
           ISG+IMQ+HHQKHHQTYITNYNKALEQLQDAIAK DSSAVVKLQ AIKFNGGGHVNHSIF
Sbjct: 57  ISGDIMQLHHQKHHQTYITNYNKALEQLQDAIAKKDSSAVVKLQGAIKFNGGGHVNHSIF 116

Query: 121 WKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQGSGWVWLGLDKEFNK 180
           WKNLAP REGGGE P GSLGWAIDTHFGSFEALI+KVNAEGAALQGSGWVWLGLDKE  +
Sbjct: 117 WKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALIQKVNAEGAALQGSGWVWLGLDKELKR 176

Query: 181 LVVETTANQDPLVTKGSSLVPLFGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYVSEVY 240
           LVVETTANQDPLVTKG +LVPL GIDVWEHAYYLQYKNVRPDYLKNIWKVINWKY SEVY
Sbjct: 177 LVVETTANQDPLVTKGPNLVPLIGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVY 236

Query: 241 EKESS 245
           EKESS
Sbjct: 237 EKESS 241


>Glyma04g39930.1 
          Length = 240

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/245 (82%), Positives = 212/245 (86%), Gaps = 5/245 (2%)

Query: 1   MAVRTLLSRKTLASVLLRNDIXXXXXXXXXXXXXXQTHSRGIHALTLPDLGYDYGALEPV 60
           MA R LL+RKTLA+VL RND                THSRG+H  TLPDL YDYGALEP 
Sbjct: 1   MAARALLTRKTLATVL-RND----AKPIIGAGIAAATHSRGLHVYTLPDLDYDYGALEPA 55

Query: 61  ISGEIMQIHHQKHHQTYITNYNKALEQLQDAIAKSDSSAVVKLQSAIKFNGGGHVNHSIF 120
           ISGEIMQ+HHQKHHQTYITN+NKALEQLQDA+AK DSSAVVKLQ AIKFNGGGHVNHSIF
Sbjct: 56  ISGEIMQLHHQKHHQTYITNFNKALEQLQDAVAKKDSSAVVKLQGAIKFNGGGHVNHSIF 115

Query: 121 WKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQGSGWVWLGLDKEFNK 180
           WKNLAP REGGGE P GSLGWAIDTHFGSFEAL++KVNAEGAALQGSGWVWLGLDKE  +
Sbjct: 116 WKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALVQKVNAEGAALQGSGWVWLGLDKELKR 175

Query: 181 LVVETTANQDPLVTKGSSLVPLFGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYVSEVY 240
           LVVETTANQDPLVTKG +LVPL GIDVWEHAYYLQYKNVRPDYLKNIWKVINWKY SEVY
Sbjct: 176 LVVETTANQDPLVTKGPNLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVY 235

Query: 241 EKESS 245
           EKESS
Sbjct: 236 EKESS 240


>Glyma04g39930.2 
          Length = 183

 Score =  272 bits (695), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 136/178 (76%), Positives = 144/178 (80%), Gaps = 5/178 (2%)

Query: 1   MAVRTLLSRKTLASVLLRNDIXXXXXXXXXXXXXXQTHSRGIHALTLPDLGYDYGALEPV 60
           MA R LL+RKTLA+VL RND                THSRG+H  TLPDL YDYGALEP 
Sbjct: 1   MAARALLTRKTLATVL-RND----AKPIIGAGIAAATHSRGLHVYTLPDLDYDYGALEPA 55

Query: 61  ISGEIMQIHHQKHHQTYITNYNKALEQLQDAIAKSDSSAVVKLQSAIKFNGGGHVNHSIF 120
           ISGEIMQ+HHQKHHQTYITN+NKALEQLQDA+AK DSSAVVKLQ AIKFNGGGHVNHSIF
Sbjct: 56  ISGEIMQLHHQKHHQTYITNFNKALEQLQDAVAKKDSSAVVKLQGAIKFNGGGHVNHSIF 115

Query: 121 WKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQGSGWVWLGLDKEF 178
           WKNLAP REGGGE P GSLGWAIDTHFGSFEAL++KVNAEGAALQGSGWV    D E 
Sbjct: 116 WKNLAPVREGGGEPPKGSLGWAIDTHFGSFEALVQKVNAEGAALQGSGWVVSCADSEI 173


>Glyma02g09630.2 
          Length = 310

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 26/212 (12%)

Query: 52  YDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLQ-DAIAKSDSSAVVKLQSAI--K 108
           Y   ALEP++S E ++ H  KHH+TY+ N N+ ++    D  +  ++  +   +  I   
Sbjct: 61  YPLSALEPIMSQETLEYHWGKHHRTYVDNLNRQIDGTDLDGNSLENTIVITYNKGDILPA 120

Query: 109 FNGGGHV-NHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQGS 167
           FN      NH  FW+++ P   GGG  P G L   I+  FGSFE  + +     +   GS
Sbjct: 121 FNNAAQAWNHDFFWESMKP---GGGGRPSGDLLNLIERDFGSFEKFLDEFKTAASTQFGS 177

Query: 168 GWVWLG-----LD----------KEFNKLVVETTANQ-DPLVTKGSSLVPLFGIDVWEHA 211
           GW WL      LD           E  KLVV  T N  +PLV   +   PL  IDVWEHA
Sbjct: 178 GWAWLAYKESRLDVENAVNPLQSDEDKKLVVVKTPNAVNPLV--WNYYHPLLTIDVWEHA 235

Query: 212 YYLQYKNVRPDYLKNIW-KVINWKYVSEVYEK 242
           Y++ ++N R DY+     K+++W  VS   E+
Sbjct: 236 YFIDFQNQRRDYISVFMDKLVSWDAVSSRLEQ 267


>Glyma02g09630.1 
          Length = 313

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 105/212 (49%), Gaps = 26/212 (12%)

Query: 52  YDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLQ-DAIAKSDSSAVVKLQSAI--K 108
           Y   ALEP++S E ++ H  KHH+TY+ N N+ ++    D  +  ++  +   +  I   
Sbjct: 64  YPLSALEPIMSQETLEYHWGKHHRTYVDNLNRQIDGTDLDGNSLENTIVITYNKGDILPA 123

Query: 109 FNGGGHV-NHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQGS 167
           FN      NH  FW+++ P   GGG  P G L   I+  FGSFE  + +     +   GS
Sbjct: 124 FNNAAQAWNHDFFWESMKP---GGGGRPSGDLLNLIERDFGSFEKFLDEFKTAASTQFGS 180

Query: 168 GWVWLG-----LD----------KEFNKLVVETTANQ-DPLVTKGSSLVPLFGIDVWEHA 211
           GW WL      LD           E  KLVV  T N  +PLV   +   PL  IDVWEHA
Sbjct: 181 GWAWLAYKESRLDVENAVNPLQSDEDKKLVVVKTPNAVNPLV--WNYYHPLLTIDVWEHA 238

Query: 212 YYLQYKNVRPDYLKNIW-KVINWKYVSEVYEK 242
           Y++ ++N R DY+     K+++W  VS   E+
Sbjct: 239 YFIDFQNQRRDYISVFMDKLVSWDAVSSRLEQ 270


>Glyma20g12510.1 
          Length = 262

 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 16/191 (8%)

Query: 41  GIHALTLPDLGYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLQDAIAKSDSSAV 100
             + LT P   Y+  ALEP +S   + +H  ++HQ +I   NK LE+  D +       +
Sbjct: 47  AFYGLTTP--PYELDALEPYMSKRTIDMHWGEYHQNFIEGLNKQLEK-DDILYGYTLDEL 103

Query: 101 VKL-----QSAIKFNGGGHV-NHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALI 154
           VK+         +FN    V NH  FW+++ P   GGG+ P   L   I+  FGSF    
Sbjct: 104 VKVTYNNGNPLPEFNNAAEVWNHDFFWESMQP---GGGDMPKLGLLQQIEKDFGSFTNFR 160

Query: 155 KKVNAEGAALQGSGWVWLGLDKEFNKLVVETTANQ-DPLVTKGSSLVPLFGIDVWEHAYY 213
           +K      +L GSGWVWL L +E  +L +  T+N   P+V      +P+  +D+WEHAYY
Sbjct: 161 EKFIGAALSLFGSGWVWLVLKREEKRLEIVKTSNAICPIVWDD---IPIINLDLWEHAYY 217

Query: 214 LQYKNVRPDYL 224
           L Y+N R  Y+
Sbjct: 218 LDYRNDRAKYV 228


>Glyma10g22680.1 
          Length = 272

 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 105/213 (49%), Gaps = 30/213 (14%)

Query: 55  GALEPVISGEIMQIHHQKHHQTYITNYNKALEQLQ-DAIAKSDSSAVVKLQSAI--KFNG 111
            +LEP++S E ++ H  KHH+TY+ N N+ ++    D  +  D+  ++  +  I   FN 
Sbjct: 23  NSLEPIMSEETIEYHWGKHHRTYVDNLNRQIDGTDLDGNSLEDTMVILYNKGDILPAFNN 82

Query: 112 GGHV-----NHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQG 166
                    NH  FW+++ P   GGG  P G L   I+  FGS +  + +     +A  G
Sbjct: 83  AAQACMLAWNHDFFWESMKP---GGGGRPSGELLKLIERDFGSLKKFLDEFKTAASAQFG 139

Query: 167 SGWVWLG-----LD----------KEFNKLVVETTANQ-DPLVTKGSSLVPLFGIDVWEH 210
           SGW WL      LD           E  KLVV  T N  +PLV   +   PL  IDVWEH
Sbjct: 140 SGWAWLAYKESRLDVGNVLNPLQSDEDKKLVVVKTPNAVNPLV--WNYYYPLLTIDVWEH 197

Query: 211 AYYLQYKNVRPDYLKNIW-KVINWKYVSEVYEK 242
           AY++ ++N R DY+     K+++W  VS   E+
Sbjct: 198 AYFIDFQNQRRDYISVFMDKLVSWDAVSSRLEQ 230


>Glyma10g33710.1 
          Length = 244

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 100/216 (46%), Gaps = 34/216 (15%)

Query: 52  YDYGALEPVISGEIMQIHHQKHHQTYITNYNKAL-------EQLQDAIAKSDSSAVVKLQ 104
           Y    LEPV+S + ++ H  KHH+TY+ N  K +       + L++ I  S +   +   
Sbjct: 35  YPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTELDGKSLEEIIVTSYNKGDI--- 91

Query: 105 SAIKFNGGGHV-NHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAA 163
               FN    V NH  FW+ + P   G        L   I+  FGSFE  + +  A  A 
Sbjct: 92  -LPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLEL---IERDFGSFEKFLDEFKAAAAT 147

Query: 164 LQGSGWVWLGL---------------DKEFNKLVVETTANQ-DPLVTKGSSLVPLFGIDV 207
             GSGW WL                   E NKLVV  + N  +PLV  G    PL  IDV
Sbjct: 148 QFGSGWAWLAYRASKFDGENAANPPSPDEDNKLVVLKSPNAVNPLVWGG--YYPLLTIDV 205

Query: 208 WEHAYYLQYKNVRPDYLKNIW-KVINWKYVSEVYEK 242
           WEHAYYL ++N RPDY+     K+++W  VS   E+
Sbjct: 206 WEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQ 241


>Glyma20g33880.1 
          Length = 177

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 82/192 (42%), Gaps = 38/192 (19%)

Query: 52  YDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLQDAIAKSDSSAVVKLQSAIKFNG 111
           Y    LEPV+S + ++ H  KHH+TY+ N  K +    +   KS    +V       +N 
Sbjct: 15  YPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVG-TELDGKSLEEIIV-----TSYNK 68

Query: 112 GGHVNHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAALQGSGWVW 171
               NH  FW+ + P   G        L   I+  FGSF   + +  A  A   GSGW W
Sbjct: 69  VQVWNHDFFWECMKPGGGGKPSGELLEL---IERDFGSFVKFLDEFKAAAATQFGSGWAW 125

Query: 172 LGLDKEFNKLVVETTANQDPLVTKGSSLVPLFGIDVWEHAYYLQYKNVRPDYLKNIW-KV 230
           L                            PL  IDVWEHAYYL ++N RPDY+     K+
Sbjct: 126 L----------------------------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKL 157

Query: 231 INWKYVSEVYEK 242
           ++W  VS   E+
Sbjct: 158 VSWDAVSSRLEQ 169


>Glyma10g33710.2 
          Length = 210

 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 31/169 (18%)

Query: 52  YDYGALEPVISGEIMQIHHQKHHQTYITNYNKAL-------EQLQDAIAKSDSSAVVKLQ 104
           Y    LEPV+S + ++ H  KHH+TY+ N  K +       + L++ I  S +   +   
Sbjct: 35  YPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTELDGKSLEEIIVTSYNKGDI--- 91

Query: 105 SAIKFNGGGHV-NHSIFWKNLAPPREGGGESPHGSLGWAIDTHFGSFEALIKKVNAEGAA 163
               FN    V NH  FW+ +     GGG  P G L   I+  FGSFE  + +  A  A 
Sbjct: 92  -LPAFNNAAQVWNHDFFWECMK---PGGGGKPSGELLELIERDFGSFEKFLDEFKAAAAT 147

Query: 164 LQGSGWVWLGL---------------DKEFNKLVVETTANQ-DPLVTKG 196
             GSGW WL                   E NKLVV  + N  +PLV  G
Sbjct: 148 QFGSGWAWLAYRASKFDGENAANPPSPDEDNKLVVLKSPNAVNPLVWGG 196