Miyakogusa Predicted Gene

Lj1g3v1182040.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1182040.2 tr|C1N1M4|C1N1M4_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_3545,30.59,5e-19,TRM,tRNA
(guanine(26)-N(2))-dimethyltransferase; N(2),N(2)-DIMETHYLGUANOSINE
TRNA METHYLTRANSFERASE,,CUFF.26925.2
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14930.1                                                       385   e-107

>Glyma06g14930.1 
          Length = 432

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/207 (85%), Positives = 193/207 (93%)

Query: 12  VTVLISGAVREAAVLGYHITPLYSYYAYHGPVFRVLLRLNRGKIHDSRHYGYIGFCHKCG 71
           + +LI G  REAA+LGYHITPL+SYYA+HGPVFRVLLRLNRGKIHDSRHYGYIG+CH+CG
Sbjct: 225 LRMLIGGVAREAALLGYHITPLFSYYAFHGPVFRVLLRLNRGKIHDSRHYGYIGYCHQCG 284

Query: 72  NSHEFSWDQLGQFSCSCSMPQVSNSLVVSGPLWTGPLHDAAYLTDMLNLAKQWGWIGCDG 131
           NSHEFSWD+LGQ SCSCS P+VSNSLVVSGPLWTGPLHDAAYLT+MLNLAKQW WI  DG
Sbjct: 285 NSHEFSWDRLGQISCSCSTPKVSNSLVVSGPLWTGPLHDAAYLTNMLNLAKQWKWIVDDG 344

Query: 132 KDSLEKLINVMVDESDPKLPFGYIKLDEMASRAKINSPPLKTLMSAIQQKGYAASRSHIK 191
           KDSLEKLI +MVDESDPKLPFGYIKLDEMASRAKINSPPLK LMSA+ QKGYAASRSHI+
Sbjct: 345 KDSLEKLIKLMVDESDPKLPFGYIKLDEMASRAKINSPPLKALMSAMHQKGYAASRSHIE 404

Query: 192 TNAIKTNCPMTECISIAKELLQVSVSS 218
           TNAIKTNCPMTECI IAKELLQ+ VS+
Sbjct: 405 TNAIKTNCPMTECIKIAKELLQLQVSA 431