Miyakogusa Predicted Gene

Lj1g3v1180820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1180820.1 Non Chatacterized Hit- tr|I1JYB4|I1JYB4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25682
PE,68.4,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mini-chromosome maintenance complex-binding
prot,CUFF.26922.1
         (505 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14860.1                                                       659   0.0  
Glyma04g39990.1                                                       658   0.0  
Glyma05g30990.1                                                        70   8e-12

>Glyma06g14860.1 
          Length = 589

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/499 (66%), Positives = 385/499 (77%), Gaps = 7/499 (1%)

Query: 1   MFGNECYIGAYKDGSAWRTNKFMDFSPVPMASPSPDTLIWERRVHYCIPIPGLNPWAEV- 59
           M GNE YIGAYKDGS WRTNKFMD S   MAS S D  IWERR+ YC+P+PGL+PW +V 
Sbjct: 83  MLGNEFYIGAYKDGSVWRTNKFMDVSQSLMAS-SVDMRIWERRLLYCVPVPGLSPWTQVS 141

Query: 60  ----GNDSMDWTSEQRVKRRRPEDDSPDMPVSCDNDQGSPSTKKMREGEDSSLTTKSQRA 115
               G+ SMD  SE R KRRR + +S DMPVS D  Q SP++K+MREGE SS+ + SQ A
Sbjct: 142 VEEFGDLSMDCKSENREKRRREDGESSDMPVSGDEVQNSPNSKRMREGEHSSVASHSQGA 201

Query: 116 SLEIAVSSTSLMSGLDSNSPACIVKIYDTPDSELNLNDIFEFVGILTDPVLHXXXXXXXX 175
           + EIA S TSL+SGLDSNSP C+VKIYD+PDSEL LNDIFEFVGILT  +          
Sbjct: 202 ATEIASSGTSLVSGLDSNSPPCLVKIYDSPDSELKLNDIFEFVGILTSDLELEEDDEDCD 261

Query: 176 XXXXXXXXXCAEFMHPKVPRLHCLIHRKLAVQDFIQNNPILEPKPDLVKGIRETFSRHLS 235
                           KVP LHC I RKLAV DF+Q+NPI+EP+P+LV+GIRE   RHL+
Sbjct: 262 LSDGFSEDPLRHLPPSKVPHLHCFIQRKLAVHDFLQHNPIVEPRPNLVRGIREALLRHLT 321

Query: 236 SVLGNDDVAAHFVLLHLFSKVHARVDDHFPVGNLSVNLTSFSKETASIFGSQLTLVVKNL 295
           +VL NDD+A HF+LLHL SKVHAR DD   VG LS+NLT FSKET S+FG  L++ +KNL
Sbjct: 322 AVLSNDDLATHFMLLHLLSKVHARADD-LAVGKLSLNLTCFSKETVSVFGKPLSVALKNL 380

Query: 296 LPFTHSIPLTVEYLNTASLVPTKNYETDRLETAVLQMAESSHLIVDETKLEAGSLNSVGV 355
           LPFT  IPLTVEYLN+ SL P KNY+T+RLET VLQ+AE SHLIVDETKLEAG+LNSVGV
Sbjct: 381 LPFTFCIPLTVEYLNSVSLTPKKNYDTNRLETGVLQLAEGSHLIVDETKLEAGTLNSVGV 440

Query: 356 ENVRLLGDLVELQKVDYNFMYCTMPIETDVQVLVLSEGKSNILPADVIVPFQPSATNCSE 415
           EN RLL +L+ELQKV+Y+F Y  + + TD Q+LVLSEGKSNILPADVIVPF+PSAT+CS 
Sbjct: 441 ENTRLLKNLMELQKVEYDFKYYKVDMTTDFQLLVLSEGKSNILPADVIVPFRPSATSCSG 500

Query: 416 AVAAETLEAWRWYLATVRQLPHSIGSEVQKVVENDFVEARQTDRSLTPQDFSRLLTMGRL 475
           AV AE LEAWRWYLATVRQL H+I  E+QKV+E+D V ARQ DRSL+ QD SRL+TMGRL
Sbjct: 501 AVTAEALEAWRWYLATVRQLSHTIEPEMQKVIESDLVAARQADRSLSSQDLSRLVTMGRL 560

Query: 476 MSKSFGETSLSLEHWQMVK 494
           MS S+GETSLSLEHWQMVK
Sbjct: 561 MSLSYGETSLSLEHWQMVK 579


>Glyma04g39990.1 
          Length = 590

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/499 (66%), Positives = 382/499 (76%), Gaps = 7/499 (1%)

Query: 1   MFGNECYIGAYKDGSAWRTNKFMDFSPVPMASPSPDTLIWERRVHYCIPIPGLNPWAEV- 59
           M GNE Y+GAYKDGS WRTNKFMD S    AS S D  IWERR+ YC+P+PGL+PW +V 
Sbjct: 83  MLGNEFYVGAYKDGSVWRTNKFMDASQSLTAS-SADMRIWERRLLYCVPVPGLSPWTQVS 141

Query: 60  ----GNDSMDWTSEQRVKRRRPEDDSPDMPVSCDNDQGSPSTKKMREGEDSSLTTKSQRA 115
               G+ SMD TSE R KRRR +D+S DMPVS D  Q SP+TK+MREGE SSL + S+ A
Sbjct: 142 TEEFGHLSMDRTSENREKRRREDDESSDMPVSGDEVQNSPNTKRMREGEHSSLASNSRGA 201

Query: 116 SLEIAVSSTSLMSGLDSNSPACIVKIYDTPDSELNLNDIFEFVGILTDPVLHXXXXXXXX 175
           + EIA S TSL+SGLDSNSP C+VKIYD+PDSEL LNDIFEFVGILT  +          
Sbjct: 202 ATEIASSGTSLVSGLDSNSPPCLVKIYDSPDSELKLNDIFEFVGILTSDLELEEDNEDCD 261

Query: 176 XXXXXXXXXCAEFMHPKVPRLHCLIHRKLAVQDFIQNNPILEPKPDLVKGIRETFSRHLS 235
                           KVP LHC IHRKLAV DF+Q+NPI+EP+P+LV+ IRE   RHL+
Sbjct: 262 LSDGISEDPLCHLPPSKVPYLHCFIHRKLAVHDFLQHNPIVEPRPNLVREIREALLRHLT 321

Query: 236 SVLGNDDVAAHFVLLHLFSKVHARVDDHFPVGNLSVNLTSFSKETASIFGSQLTLVVKNL 295
           +VLGNDD A HF+LLHL S VHAR DD   VG LS+NLT FSKE  S+FG  L+  +KNL
Sbjct: 322 AVLGNDDFATHFMLLHLLSNVHARADD-LAVGKLSLNLTCFSKEIVSVFGKPLSAALKNL 380

Query: 296 LPFTHSIPLTVEYLNTASLVPTKNYETDRLETAVLQMAESSHLIVDETKLEAGSLNSVGV 355
           LPFT  IPLTVEYLNT SLVP KNY+T+RLET V Q+AE SHLIVDETKLEAG+LNSVGV
Sbjct: 381 LPFTFYIPLTVEYLNTVSLVPKKNYDTNRLETGVFQLAEGSHLIVDETKLEAGTLNSVGV 440

Query: 356 ENVRLLGDLVELQKVDYNFMYCTMPIETDVQVLVLSEGKSNILPADVIVPFQPSATNCSE 415
           EN RLL +L+ELQKV+Y+F Y  + + TD Q+LVLSEGKSNILPADVIVPF+PSAT+CSE
Sbjct: 441 ENTRLLKNLMELQKVEYDFKYYKVDMATDFQLLVLSEGKSNILPADVIVPFRPSATSCSE 500

Query: 416 AVAAETLEAWRWYLATVRQLPHSIGSEVQKVVENDFVEARQTDRSLTPQDFSRLLTMGRL 475
           AV AE LEAWRWYLATVRQL H+I  E+QKVVE D V ARQ DRSL+ QD SRL+TMGRL
Sbjct: 501 AVTAEALEAWRWYLATVRQLSHTIEPEMQKVVETDLVAARQADRSLSSQDLSRLVTMGRL 560

Query: 476 MSKSFGETSLSLEHWQMVK 494
           MS S+GETSLSLEHWQ VK
Sbjct: 561 MSLSYGETSLSLEHWQTVK 579


>Glyma05g30990.1 
          Length = 430

 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 45/56 (80%), Gaps = 6/56 (10%)

Query: 207 QDFIQNNPILEPKPDLVKGIRETFSRHLSSVLGNDDVA--AHFVLLHLFSKVHARV 260
           +DF+QNNP +E K +LVKGI     RHL++VLG+DDVA  AHF+LLHL +KVHAR+
Sbjct: 133 KDFLQNNPFIELKSNLVKGIL----RHLTAVLGDDDVARSAHFMLLHLLAKVHARM 184