Miyakogusa Predicted Gene

Lj1g3v1147570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1147570.1 tr|Q8LPR2|Q8LPR2_ARATH At3g19895 OS=Arabidopsis
thaliana PE=2 SV=1,41.67,0.0000000000002,RING/U-box,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; seg,NULL,CUFF.26891.1
         (406 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40060.1                                                       497   e-140
Glyma12g03270.1                                                       164   1e-40
Glyma06g14800.1                                                       163   3e-40
Glyma11g11070.1                                                       163   4e-40
Glyma06g14790.1                                                        91   2e-18

>Glyma04g40060.1 
          Length = 426

 Score =  497 bits (1279), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 282/435 (64%), Positives = 304/435 (69%), Gaps = 38/435 (8%)

Query: 1   MSSDDITLVSGQRIENGLTSPLVFQDD---FN---PQR----NPAPKTRELGGGFIDDKI 50
           MSS+DITLV  QRIENGL SPLVFQDD   FN   P +    +P PKTRELG    D+K+
Sbjct: 1   MSSEDITLVPDQRIENGLNSPLVFQDDPLRFNCPTPHQRRVGDPPPKTRELGAFIDDNKM 60

Query: 51  FTIDRDRDRFFTTP-GAEFRRNVYA------DRPDVRNWRGNGTPSSXXXXXXXXXXXXX 103
           F    DRDRFF      EFRR  YA      D P  RNW                     
Sbjct: 61  FI---DRDRFFAAAQNPEFRR--YADCSARRDPPHARNWSATDDDEESDDDDEDDDDDEA 115

Query: 104 XXXX--------XXAEVVRLKGNSNVINDDGVANGKTQHHSPYVSGRDLLXX---XXXXX 152
                         +E+     N+   N   VANGK   HS YVSGR+LL          
Sbjct: 116 DDTEVGGLVGDGTKSELNNNNNNNGGANLPAVANGKA--HS-YVSGRELLVKDGGDIGQL 172

Query: 153 XXXXXXXXXXHRRRERLGKSQGSVSVAETDCEEYYSQFLHGTEGSASVQKAMVDDNGCGF 212
                       R+E LGKSQ SV+VAETDCEEYYS +LHG EG AS QK MVDD+GCGF
Sbjct: 173 VHSNVSGGDEDHRQEGLGKSQNSVTVAETDCEEYYSHYLHGGEG-ASGQKVMVDDSGCGF 231

Query: 213 SGRKDVMFSTESGESLRAILSDPVTGALMEDAMILPCGHSFGGGGIQHVTRMKACCTCSQ 272
           SGRKD M+S+ESGESLRAILSDPVTGALM+DAMILPCGHSFGGGGI+H  RMKACCTCSQ
Sbjct: 232 SGRKDAMYSSESGESLRAILSDPVTGALMDDAMILPCGHSFGGGGIEHAIRMKACCTCSQ 291

Query: 273 PVSEESISPNLSLQAAVQAYRREEESQFYRSSKRRRERLDQGGFGDSPVMESSRSRGVQF 332
           P +EESISPNLSL+ AVQAYRREEESQFYRS KRRRER DQGGFGDS VME SRSRGVQF
Sbjct: 292 PTTEESISPNLSLRIAVQAYRREEESQFYRSPKRRRERFDQGGFGDSVVMEPSRSRGVQF 351

Query: 333 PFAVMDRVVIKGNKRTPPRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDD 392
           PFAVMDRV+IKGNKRTP RFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV+DD
Sbjct: 352 PFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVMDD 411

Query: 393 PSKP-ASSKMVPNWV 406
           PSKP ASSKM PNW+
Sbjct: 412 PSKPAASSKMPPNWL 426


>Glyma12g03270.1 
          Length = 477

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 128/192 (66%), Gaps = 18/192 (9%)

Query: 227 SLRAILSDPVTGALMEDAMILPCGHSFGGGGIQHVTRMKACCTCSQPVSEESISPNLSLQ 286
           SLR++LSDP++G  +EDAM++ CGHSFGG  ++ V     C  C+  +   S+ PN +L+
Sbjct: 287 SLRSVLSDPLSGTFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNAEIETGSLIPNHALR 346

Query: 287 AAVQAYRREEESQFYRSS---KRRRERLDQ-----------GGFGDSPVMESSRSRGVQF 332
           AA  A + E++ + +R++   KRR+E  DQ           G F  +  ++    RGVQ+
Sbjct: 347 AAAAAVKHEDDRRLFRNAALRKRRKEMGDQMDSMRRVNRENGDFNATDGLQ----RGVQY 402

Query: 333 PFAVMDRVVIKGNKRTPPRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDD 392
           PF+V ++VVIKGN+RTP +FVG+EA++T+QCLNGWY++K ++  E+V+LQYRSL K+L+ 
Sbjct: 403 PFSVNEKVVIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKILNS 462

Query: 393 PSKPASSKMVPN 404
           P+    S+ + N
Sbjct: 463 PADQCPSQPIQN 474


>Glyma06g14800.1 
          Length = 86

 Score =  163 bits (412), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/86 (91%), Positives = 82/86 (95%), Gaps = 1/86 (1%)

Query: 322 MESSRSRGVQFPFAVMDRVVIKGNKRTPPRFVGREAIVTTQCLNGWYVVKTLDNAESVKL 381
           ME SRSRGVQFPFAVMDRV+IKGNKRTP RFVGREAIVTTQCLNGWYVVKTLDNAESVKL
Sbjct: 1   MEPSRSRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKL 60

Query: 382 QYRSLAKVLDDPSKP-ASSKMVPNWV 406
           QYRSLAKV+DDPSKP ASSKM PNW+
Sbjct: 61  QYRSLAKVMDDPSKPAASSKMPPNWL 86


>Glyma11g11070.1 
          Length = 585

 Score =  163 bits (412), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 83/189 (43%), Positives = 127/189 (67%), Gaps = 12/189 (6%)

Query: 227 SLRAILSDPVTGALMEDAMILPCGHSFGGGGIQHVTRMKACCTCSQPVSEESISPNLSLQ 286
           SLR++LSDP++G  +EDAM++ CGHSFGG  ++ V     C  C+  +   S+ PN +L+
Sbjct: 395 SLRSVLSDPLSGTFLEDAMLVSCGHSFGGLMLRRVIETSKCTLCNVEIETGSLIPNHALR 454

Query: 287 AAVQAYRREEESQFYRSS---KRRRERLDQ--------GGFGDSPVMESSRSRGVQFPFA 335
           AA  A + E++ + +R++   KRR+E  DQ        G  GD    +  + RGVQ+PF 
Sbjct: 455 AAAAAVKHEDDRRLFRNAALRKRRKEMGDQMDSMRRVNGENGDFTAADGLQ-RGVQYPFL 513

Query: 336 VMDRVVIKGNKRTPPRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDPSK 395
           V ++VVIKGN+RTP +FVG+EA++T+QCLNGWY++K ++  E+V+LQYRSL K+L+ P+ 
Sbjct: 514 VNEKVVIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLNSPAD 573

Query: 396 PASSKMVPN 404
              S+ + N
Sbjct: 574 QCPSQPIQN 582


>Glyma06g14790.1 
          Length = 58

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/46 (89%), Positives = 45/46 (97%)

Query: 219 MFSTESGESLRAILSDPVTGALMEDAMILPCGHSFGGGGIQHVTRM 264
           M+S+ESGESLRAILSDPVTGALM+DA+ILPCGHSFGGGGIQHV RM
Sbjct: 1   MYSSESGESLRAILSDPVTGALMDDAVILPCGHSFGGGGIQHVIRM 46