Miyakogusa Predicted Gene

Lj1g3v1134040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1134040.1 Non Chatacterized Hit- tr|D8QRJ9|D8QRJ9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.56,0.0000000001,no description,Transcription factor IIS,
N-terminal; no description,Transcription elongation factor
,CUFF.27141.1
         (369 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40150.1                                                       537   e-153
Glyma06g14690.1                                                       515   e-146
Glyma04g07580.1                                                        63   5e-10
Glyma06g07700.1                                                        59   8e-09
Glyma19g36340.1                                                        49   7e-06

>Glyma04g40150.1 
          Length = 400

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/369 (72%), Positives = 288/369 (78%), Gaps = 1/369 (0%)

Query: 1   MEKELVELYEXXXXXXXXXXXXXXEHEETRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
           MEKELVELYE              +HEE+RCIDALEQLKKFPVNYKILVNTQVGKHLKVL
Sbjct: 33  MEKELVELYEAAKKAADAAISGDGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 92

Query: 61  TKHPKPKIKAFAVELIEIWKGIIIKETSKNKNGGSDNKVESANGDRAKAGKMQKSPSXXX 120
           TKHP+ KIKAFA++LIEIWKGIIIKETSKNKNGGSD+KVESANG+++KAGKMQKSPS   
Sbjct: 93  TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPSVKV 152

Query: 121 XXXXXXXXXXIDRNGTPRSSSENTNKARNVDVKIEKTERAASVKVEKIXXXXXXXXXXXX 180
                     IDRNGT +SSSEN  K +N DVK EKT+R+ASVKVEKI            
Sbjct: 153 EKGETVKVEKIDRNGTTKSSSENMKKVQN-DVKNEKTDRSASVKVEKIAKEEKPVSGAKK 211

Query: 181 XXXXXXXPPKLTSMIKSNDSARDKIRELLREALSKVSEEADGDMMDEVNACDPIRVAVKV 240
                  PPKL +MIKSND+ RDKIRE+L EALSKV+ EAD D++D VN  DPIRVAV V
Sbjct: 212 MSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRVAVTV 271

Query: 241 ESVLFENWGASNGAQKVKYRSLMFNLKDAKNPDFRRKVLLGVIEPERLVNMSTAEMASXX 300
           ESVLFE WG SNGAQKVKYRSLMFNLKD+ NPDFRRKVLLGVIEPE+L+NMSTAEMAS  
Sbjct: 272 ESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQ 331

Query: 301 XXXXXXXXXXXALFECERGAPPKATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCT 360
                      ALFECERG PPKATTDQFKCGRCGQRK TYYQMQTRSADEPMTTYVTC 
Sbjct: 332 RKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCV 391

Query: 361 VCNNRWKFC 369
           VCNNRWKFC
Sbjct: 392 VCNNRWKFC 400


>Glyma06g14690.1 
          Length = 367

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/369 (69%), Positives = 283/369 (76%), Gaps = 2/369 (0%)

Query: 1   MEKELVELYEXXXXXXXXXXXXXXEHEETRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
           MEKELVELYE              EHEE+RCIDALEQLKKFPVNYKILVNTQVGKHLKVL
Sbjct: 1   MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60

Query: 61  TKHPKPKIKAFAVELIEIWKGIIIKETSKNKNGGSDNKVESANGDRAKAGKMQKSPSXXX 120
           TKHP+ KIK+FA++LIEIWKGIIIKETSKNKNGGSD+K ESAN +++KAGKMQKSPS   
Sbjct: 61  TKHPRQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDSKDESANREKSKAGKMQKSPSVKI 120

Query: 121 XXXXXXXXXXIDRNGTPRSSSENTNKARNVDVKIEKTERAASVKVEKIXXXXXXXXXXXX 180
                     I+RNGT +SS EN  K +N DVK E+T+RAASVK+EKI            
Sbjct: 121 EKGETVKVEKIERNGTSKSSFENMKKVQN-DVKNERTDRAASVKMEKIAEEKPISGAKKM 179

Query: 181 XXXXXXXPPKLTSMIKSNDSARDKIRELLREALSKVSEEADGDMMDEVNACDPIRVAVKV 240
                  PPKL +MIKSND+ RDKIRE+L EALSKV+ EAD D++  VN  DPIRVAV V
Sbjct: 180 SSSSTA-PPKLKTMIKSNDATRDKIREILHEALSKVTREADEDLVAVVNDSDPIRVAVTV 238

Query: 241 ESVLFENWGASNGAQKVKYRSLMFNLKDAKNPDFRRKVLLGVIEPERLVNMSTAEMASXX 300
           ESVLFE WG SNGAQKVKYRSLMFNLKD+ NPDFRRKVLLGV+EPE+L+NMSTAEMAS  
Sbjct: 239 ESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQ 298

Query: 301 XXXXXXXXXXXALFECERGAPPKATTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCT 360
                      ALFECERG  PKATTDQFKCGRCGQRK TYYQMQTRSADEPMTTYVTC 
Sbjct: 299 RKQEYQKITEKALFECERGGQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCC 358

Query: 361 VCNNRWKFC 369
           VCNNRWKFC
Sbjct: 359 VCNNRWKFC 367


>Glyma04g07580.1 
          Length = 970

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 44/66 (66%)

Query: 233 PIRVAVKVESVLFENWGASNGAQKVKYRSLMFNLKDAKNPDFRRKVLLGVIEPERLVNMS 292
           P  +A ++E+ LF+ +G  N   K K RSL+FNLKD  NP+ R +V+ G I PE+L +M+
Sbjct: 284 PKLLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMT 343

Query: 293 TAEMAS 298
             E+AS
Sbjct: 344 AEELAS 349


>Glyma06g07700.1 
          Length = 1049

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 233 PIRVAVKVESVLFENWGASNGAQKVKYRSLMFNLKDAKNPDFRRKVLLGVIEPERLVNMS 292
           P  +A ++E+ LF+ +   N   K K RSL+FNLKD  NP+ R +V+ G I PE+L +M+
Sbjct: 366 PELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMT 425

Query: 293 TAEMAS 298
             E+AS
Sbjct: 426 AEELAS 431


>Glyma19g36340.1 
          Length = 110

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 25/36 (69%)

Query: 330 KCGRCGQRKCTYYQMQTRSADEPMTTYVTCTVCNNR 365
           KCG+CG  + TYY  Q RSADE  TT+ TCT C ++
Sbjct: 71  KCGKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQ 106