Miyakogusa Predicted Gene

Lj1g3v1090980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1090980.1 Non Chatacterized Hit- tr|K4D258|K4D258_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.28,3e-19,SUBFAMILY NOT NAMED,NULL; NASCENT POLYPEPTIDE
ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED,NULL; seg,NUL,CUFF.26791.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40550.1                                                       131   2e-31
Glyma06g14250.1                                                       130   3e-31
Glyma06g14260.1                                                       127   4e-30
Glyma04g40540.1                                                       116   9e-27
Glyma04g40550.3                                                       100   4e-22
Glyma04g40550.2                                                        98   2e-21
Glyma19g30540.1                                                        91   3e-19
Glyma03g27580.2                                                        91   5e-19
Glyma03g27580.1                                                        91   5e-19
Glyma03g27570.1                                                        90   7e-19
Glyma19g30550.1                                                        90   7e-19

>Glyma04g40550.1 
          Length = 223

 Score =  131 bits (330), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 81/136 (59%), Gaps = 3/136 (2%)

Query: 1   MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVXXXXXXXXXXXXXXXXXXX 60
           M+PGPVVDAS E +A +Q+ S ++ T KK PQPQEDDAP+V                   
Sbjct: 1   MSPGPVVDASPEVDAEQQLPSVDDATQKKIPQPQEDDAPLVEDLKDDDKDDDDEDDDDDD 60

Query: 61  XXXXXXXXXGALXXXXXXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 120
                    G                   AMLKLGLKPVTGVSRVTIKRTKNILFFISKP
Sbjct: 61  EDDKEDDAQGG---AEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 117

Query: 121 DVFKSPNSETYVIFGE 136
           DVFKSPNSETYVIFGE
Sbjct: 118 DVFKSPNSETYVIFGE 133


>Glyma06g14250.1 
          Length = 223

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 81/136 (59%), Gaps = 3/136 (2%)

Query: 1   MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVXXXXXXXXXXXXXXXXXXX 60
           M+PGPVVDAS E EA +Q+ S ++ T  KK QPQEDDAP+V                   
Sbjct: 1   MSPGPVVDASPEVEAEQQLPSVDDATQLKKSQPQEDDAPVVEDVRDDDKDDDDEDDDDDD 60

Query: 61  XXXXXXXXXGALXXXXXXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 120
                     AL                 AMLKLGLKPVTGVSRVTIKRTKNILFFISKP
Sbjct: 61  EDDKEDD---ALGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 117

Query: 121 DVFKSPNSETYVIFGE 136
           DVFKSPNSETYVIFGE
Sbjct: 118 DVFKSPNSETYVIFGE 133


>Glyma06g14260.1 
          Length = 225

 Score =  127 bits (319), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 80/136 (58%), Gaps = 3/136 (2%)

Query: 1   MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVXXXXXXXXXXXXXXXXXXX 60
           M+PGPV+DA+++  A +Q+ S ++  LKKK  PQEDDAPIV                   
Sbjct: 1   MSPGPVIDAATDPGADQQIPSVDDAILKKKAHPQEDDAPIVEDVKDDDKEETEDEDEDDD 60

Query: 61  XXXXXXXXXGALXXXXXXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 120
                    G                   AMLKLGLKPVTGVSRVTIKRTKNILFFISKP
Sbjct: 61  DDDKEDDAQGG---AEGGKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 117

Query: 121 DVFKSPNSETYVIFGE 136
           DVFKSPNSETY+IFGE
Sbjct: 118 DVFKSPNSETYIIFGE 133


>Glyma04g40540.1 
          Length = 218

 Score =  116 bits (290), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 78/136 (57%), Gaps = 9/136 (6%)

Query: 1   MAPGPVVDASSEAEALEQVLSAEETTLKKKPQPQEDDAPIVXXXXXXXXXXXXXXXXXXX 60
           M+PGPV+DA ++    +Q+   ++ +LKKKP P EDDAPIV                   
Sbjct: 1   MSPGPVLDAGAD----QQIPFVDDASLKKKPHPLEDDAPIVEDVKDDDKDETEDEDEDDD 56

Query: 61  XXXXXXXXXGALXXXXXXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 120
                     A                  AMLKLGLKPVTGVSRVTIKRTKNILFFISKP
Sbjct: 57  DKEDD-----AQGAAEGGKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKP 111

Query: 121 DVFKSPNSETYVIFGE 136
           DVFKSPNSETYVIFGE
Sbjct: 112 DVFKSPNSETYVIFGE 127


>Glyma04g40550.3 
          Length = 162

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/47 (100%), Positives = 47/47 (100%)

Query: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE
Sbjct: 26  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 72


>Glyma04g40550.2 
          Length = 136

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/46 (100%), Positives = 46/46 (100%)

Query: 91  MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE
Sbjct: 1   MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 46


>Glyma19g30540.1 
          Length = 202

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 40/47 (85%), Positives = 45/47 (95%)

Query: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP SETY+IFGE
Sbjct: 70  AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSETYIIFGE 116


>Glyma03g27580.2 
          Length = 197

 Score = 90.5 bits (223), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 45/47 (95%)

Query: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGE
Sbjct: 64  AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGE 110


>Glyma03g27580.1 
          Length = 198

 Score = 90.5 bits (223), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 45/47 (95%)

Query: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGE
Sbjct: 65  AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGE 111


>Glyma03g27570.1 
          Length = 203

 Score = 89.7 bits (221), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 45/47 (95%)

Query: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGE
Sbjct: 71  AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGE 117


>Glyma19g30550.1 
          Length = 201

 Score = 89.7 bits (221), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 45/47 (95%)

Query: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGE 136
           AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGE
Sbjct: 69  AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGE 115