Miyakogusa Predicted Gene

Lj1g3v1079500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1079500.1 Non Chatacterized Hit- tr|E1ZE57|E1ZE57_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.44,2e-17,seg,NULL,CUFF.26770.1
         (299 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40620.1                                                       382   e-106
Glyma06g14170.1                                                       370   e-103

>Glyma04g40620.1 
          Length = 292

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/291 (69%), Positives = 218/291 (74%), Gaps = 16/291 (5%)

Query: 17  PITNLPSLPDLYLTTLSVCFLFTSSRSH--HSTSCPFPSLPLNRRRFLKIPAMS-HSTTX 73
           P T LPSLPDL LT LSVCFL +SS+ H   ST CPFP      RRFLKIPAMS  +TT 
Sbjct: 6   PQTTLPSLPDLLLTALSVCFLVSSSKPHIGGSTRCPFP------RRFLKIPAMSLTNTTT 59

Query: 74  XXXXXXXXXXXXXXXXXRHSFASPQSLSDWLKPRLPTDSFATWGVKPGTKNVHNLWLEIA 133
                            RHSFASPQSLS+WLKPRLP++SFA+WGVKPGTKNVHNLWLE++
Sbjct: 60  SKSSKNNNLNNTLLPPRRHSFASPQSLSEWLKPRLPSESFASWGVKPGTKNVHNLWLELS 119

Query: 134 EGETSLEDSTPPIXXXXXXXXXXXGKDGKFLVESHQELSDGNVRKRGRPLSEKMKPNEDP 193
           +GETSL DSTPP+           GK GK LVESHQELSDGNVRKRGRPLSEKMKPNEDP
Sbjct: 120 QGETSLADSTPPVRTVHVVLVRVTGKHGKILVESHQELSDGNVRKRGRPLSEKMKPNEDP 179

Query: 194 ESAAVRAIREELGSLIGGGAEG------DIVTIDPNSYEMREEERCSGSYPGLPGCYVLH 247
           ESAAVR I EELGS IGGG         DIVTIDPNSYEMR EER SGSYPGLPGCYVLH
Sbjct: 180 ESAAVRGIMEELGSAIGGGFRAANFEIDDIVTIDPNSYEMRVEERDSGSYPGLPGCYVLH 239

Query: 248 TLNATVEGLPEGDFCTYEHDEY-SCLDDKKVANQAVGVRKHHWTWVSADSL 297
           TL+ATVEGLPEGDF TYE DEY     DK VA++AV V+KHHWTWVSADS+
Sbjct: 240 TLSATVEGLPEGDFSTYEVDEYGGVFQDKIVADEAVSVKKHHWTWVSADSM 290


>Glyma06g14170.1 
          Length = 291

 Score =  370 bits (950), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/288 (68%), Positives = 219/288 (76%), Gaps = 15/288 (5%)

Query: 19  TNLPSLPDLYLTTLSVCFLFTSSRSH--HSTSCPFPSLPLNRRRFLKIPAMSHSTTXXXX 76
           T LPSLPDL LT LSVCFL +SS+ H   ST CPFP      RRFLKIPAMS +T     
Sbjct: 8   TTLPSLPDLLLTALSVCFLVSSSKPHIGGSTRCPFP------RRFLKIPAMSLTTITTTS 61

Query: 77  XXXXXXXXXXXXX--XRHSFASPQSLSDWLKPRLPTDSFATWGVKPGTKNVHNLWLEIAE 134
                           RHSFASPQSLS+WLKPRLP++SFA+WGVKPGTKNVHNLWLE+++
Sbjct: 62  TSSKNNNNLNSHLPPRRHSFASPQSLSEWLKPRLPSESFASWGVKPGTKNVHNLWLELSQ 121

Query: 135 GETSLEDSTPPIXXXXXXXXXXXGKDGKFLVESHQELSDGNVRKRGRPLSEKMKPNEDPE 194
           GETSL DSTPP+           GK G+ LVESHQ+LSDG+VRKRGRPLSEKMKPNEDPE
Sbjct: 122 GETSLADSTPPVRTVHVVLVRVTGKHGRILVESHQDLSDGSVRKRGRPLSEKMKPNEDPE 181

Query: 195 SAAVRAIREELGSLIGGGAEG----DIVTIDPNSYEMREEERCSGSYPGLPGCYVLHTLN 250
           SAAVR I EELGS IGGGA+     DIVTIDPNSYEMR EER SGSYPGLPGCYVLHTL+
Sbjct: 182 SAAVRGIMEELGSAIGGGAKNFEIDDIVTIDPNSYEMRVEERDSGSYPGLPGCYVLHTLS 241

Query: 251 ATVEGLPEGDFCTYEHDEY-SCLDDKKVANQAVGVRKHHWTWVSADSL 297
           ATVE LPEGDFCTYE DEY    +DK VA++AV V+KH+WTWVSADS+
Sbjct: 242 ATVECLPEGDFCTYEVDEYGGVFEDKIVADEAVSVKKHYWTWVSADSI 289