Miyakogusa Predicted Gene

Lj1g3v1074620.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1074620.3 tr|Q7V2R9|Q7V2R9_PROMP Light repressed protein A
homolog OS=Prochlorococcus marinus subsp. pastoris ,39.76,3e-19,no
description,Ribosomal protein S30Ae/sigma 54 modulation protein;
Ribosome binding protein Y (YfiA,CUFF.26709.3
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14140.1                                                       251   3e-67
Glyma04g40650.1                                                       251   3e-67
Glyma06g14140.2                                                       162   3e-40

>Glyma06g14140.1 
          Length = 291

 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/162 (79%), Positives = 136/162 (83%), Gaps = 3/162 (1%)

Query: 41  IVREIDVRLSTRGGGEFGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQR 100
           +VRE+DVRLS RGGGEFGRGPRT RCEVTLFTKRHGVVRAEED+E+TY SIDLVSSIIQR
Sbjct: 103 LVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQR 162

Query: 101 KLRKIKEKVSDHGRHMKGFNRAKVRXXXXXXXXXXXXXXISPLEEEGEATLVEVVRTKYF 160
           KLRKIKEKVSDHGRHMKGFNR KVR              +SP EE  E ++ EVVRTKYF
Sbjct: 163 KLRKIKEKVSDHGRHMKGFNRLKVR-EPVEQLPMEEDEILSPREE--EESIDEVVRTKYF 219

Query: 161 DMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 202
           DMPPLTV+EAIEQL NVDH FY FRNEETGEINIVYKRKEGG
Sbjct: 220 DMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYKRKEGG 261


>Glyma04g40650.1 
          Length = 291

 Score =  251 bits (641), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/162 (79%), Positives = 136/162 (83%), Gaps = 3/162 (1%)

Query: 41  IVREIDVRLSTRGGGEFGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQR 100
           +VRE+DVRLS RGGGEFGRGPRT RCEVTLFTKRHGVVRAEED+E+TY SIDLVSSIIQR
Sbjct: 103 LVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQR 162

Query: 101 KLRKIKEKVSDHGRHMKGFNRAKVRXXXXXXXXXXXXXXISPLEEEGEATLVEVVRTKYF 160
           KLRKIKEKVSDHGRHMKGFNR KVR              +SP EE  E ++ EVVRTKYF
Sbjct: 163 KLRKIKEKVSDHGRHMKGFNRLKVR-EPVEQLPVEEDEILSPQEE--EESIDEVVRTKYF 219

Query: 161 DMPPLTVSEAIEQLVNVDHAFYAFRNEETGEINIVYKRKEGG 202
           DMPPLTV+EAIEQL NVDH FY FRNEETGEINIVYKRKEGG
Sbjct: 220 DMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVYKRKEGG 261


>Glyma06g14140.2 
          Length = 248

 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 77/85 (90%), Positives = 81/85 (95%)

Query: 41  IVREIDVRLSTRGGGEFGRGPRTSRCEVTLFTKRHGVVRAEEDSETTYASIDLVSSIIQR 100
           +VRE+DVRLS RGGGEFGRGPRT RCEVTLFTKRHGVVRAEED+E+TY SIDLVSSIIQR
Sbjct: 103 LVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQR 162

Query: 101 KLRKIKEKVSDHGRHMKGFNRAKVR 125
           KLRKIKEKVSDHGRHMKGFNR KVR
Sbjct: 163 KLRKIKEKVSDHGRHMKGFNRLKVR 187