Miyakogusa Predicted Gene

Lj1g3v1073610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1073610.1 Non Chatacterized Hit- tr|A5CA87|A5CA87_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46.43,0.000000000002,seg,NULL; RRM,RNA recognition motif domain;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no desc,CUFF.26724.1
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14030.1                                                       146   5e-36
Glyma04g40760.1                                                       145   6e-36
Glyma04g40750.2                                                       143   4e-35
Glyma04g40750.1                                                       143   4e-35
Glyma06g14050.2                                                       143   5e-35
Glyma06g14050.1                                                       143   5e-35
Glyma15g40060.1                                                       125   9e-30
Glyma08g18810.1                                                       123   4e-29
Glyma08g18810.3                                                       123   4e-29
Glyma08g18810.2                                                       123   5e-29
Glyma06g14030.2                                                        69   1e-12

>Glyma06g14030.1 
          Length = 378

 Score =  146 bits (368), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 68/73 (93%), Positives = 72/73 (98%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEVQRLRLLGD++HSTRIAFVEF VAESAIAA
Sbjct: 287 MCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIAA 346

Query: 61  LSCSGVILGSLPI 73
           LSCSGVILGSLPI
Sbjct: 347 LSCSGVILGSLPI 359



 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AF+EF   E A AA
Sbjct: 190 MTRRTVYVSDIDQLVTEEQLAALFLN-CGQVVDCRVCGDPNSILRFAFIEFTDEEGARAA 248

Query: 61  LSCSGVILGSLPI 73
           L+ SG +LG  P+
Sbjct: 249 LNLSGTMLGYYPL 261


>Glyma04g40760.1 
          Length = 380

 Score =  145 bits (367), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 68/73 (93%), Positives = 72/73 (98%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEVQRLRLLGD++HSTRIAFVEF VAESAIAA
Sbjct: 289 MCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIAA 348

Query: 61  LSCSGVILGSLPI 73
           LSCSGVILGSLPI
Sbjct: 349 LSCSGVILGSLPI 361



 Score = 57.8 bits (138), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AFVEF   + A AA
Sbjct: 192 MIRRTVYVSDIDQLVTEEQLAGLFLN-CGQVVDCRVCGDPNSILRFAFVEFTDEDGARAA 250

Query: 61  LSCSGVILGSLPI 73
           L+ SG +LG  P+
Sbjct: 251 LNLSGTMLGYYPL 263


>Glyma04g40750.2 
          Length = 369

 Score =  143 bits (361), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 66/73 (90%), Positives = 71/73 (97%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEV RLRLLGD++HSTRIAFVEF +AESAIAA
Sbjct: 278 MCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAA 337

Query: 61  LSCSGVILGSLPI 73
           LSCSGVILGSLPI
Sbjct: 338 LSCSGVILGSLPI 350



 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AFVEF   E A AA
Sbjct: 181 MIRRTVYVSDIDQLVTEEQLAALFLN-CGQVVDCRVCGDPNSILRFAFVEFTDEEGARAA 239

Query: 61  LSCSGVILGSLPI 73
           LS SG +LG  P+
Sbjct: 240 LSLSGTMLGYYPL 252


>Glyma04g40750.1 
          Length = 369

 Score =  143 bits (361), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 66/73 (90%), Positives = 71/73 (97%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEV RLRLLGD++HSTRIAFVEF +AESAIAA
Sbjct: 278 MCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAA 337

Query: 61  LSCSGVILGSLPI 73
           LSCSGVILGSLPI
Sbjct: 338 LSCSGVILGSLPI 350



 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AFVEF   E A AA
Sbjct: 181 MIRRTVYVSDIDQLVTEEQLAALFLN-CGQVVDCRVCGDPNSILRFAFVEFTDEEGARAA 239

Query: 61  LSCSGVILGSLPI 73
           LS SG +LG  P+
Sbjct: 240 LSLSGTMLGYYPL 252


>Glyma06g14050.2 
          Length = 369

 Score =  143 bits (360), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 66/73 (90%), Positives = 71/73 (97%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEV RLRLLGD++HSTRIAFVEF +AESAIAA
Sbjct: 278 MCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAA 337

Query: 61  LSCSGVILGSLPI 73
           LSCSGVILGSLPI
Sbjct: 338 LSCSGVILGSLPI 350



 Score = 59.3 bits (142), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AF+EF   E A AA
Sbjct: 181 MIRRTVYVSDIDQLVTEEQLAALFLN-CGQVVDCRVCGDPNSILRFAFIEFTDDEGARAA 239

Query: 61  LSCSGVILGSLPI 73
           LS SG +LG  P+
Sbjct: 240 LSLSGTMLGYYPL 252


>Glyma06g14050.1 
          Length = 369

 Score =  143 bits (360), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 66/73 (90%), Positives = 71/73 (97%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEV RLRLLGD++HSTRIAFVEF +AESAIAA
Sbjct: 278 MCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAA 337

Query: 61  LSCSGVILGSLPI 73
           LSCSGVILGSLPI
Sbjct: 338 LSCSGVILGSLPI 350



 Score = 59.3 bits (142), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AF+EF   E A AA
Sbjct: 181 MIRRTVYVSDIDQLVTEEQLAALFLN-CGQVVDCRVCGDPNSILRFAFIEFTDDEGARAA 239

Query: 61  LSCSGVILGSLPI 73
           LS SG +LG  P+
Sbjct: 240 LSLSGTMLGYYPL 252


>Glyma15g40060.1 
          Length = 296

 Score =  125 bits (315), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 67/73 (91%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MC+RT+YCTNIDKK++Q++VKNFFES CGEV RLRLLGDH HSTRIAFVEF +AESAI A
Sbjct: 205 MCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIAFVEFAMAESAIIA 264

Query: 61  LSCSGVILGSLPI 73
           L+CSG++LG+ PI
Sbjct: 265 LNCSGMLLGTQPI 277



 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 4   RTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSC 63
           RT+Y + ID+ +T+  +   F S CG+V   R+ GD +   R AFVEF     A  AL+ 
Sbjct: 111 RTVYVSEIDQHVTEERLAALFSS-CGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNL 169

Query: 64  SGVILGSLPI 73
            G +LG  P+
Sbjct: 170 GGTVLGYYPV 179


>Glyma08g18810.1 
          Length = 296

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 66/73 (90%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MC+RTIYCTNIDKK++Q++VKNFFES CGEV RLRLLGD  HSTRIAFVEF +AESAI A
Sbjct: 205 MCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESAIIA 264

Query: 61  LSCSGVILGSLPI 73
           L+CSG++LG+ PI
Sbjct: 265 LNCSGMLLGTQPI 277



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 4   RTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSC 63
           RT+Y + ID+ +T+  +   F S CG+V   R+ GD +   R AFVEF     A  AL+ 
Sbjct: 111 RTVYVSEIDQHVTEERLAALFSS-CGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNL 169

Query: 64  SGVILGSLPI 73
            G +LG  P+
Sbjct: 170 GGTVLGYYPV 179


>Glyma08g18810.3 
          Length = 280

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 66/73 (90%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MC+RTIYCTNIDKK++Q++VKNFFES CGEV RLRLLGD  HSTRIAFVEF +AESAI A
Sbjct: 189 MCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESAIIA 248

Query: 61  LSCSGVILGSLPI 73
           L+CSG++LG+ PI
Sbjct: 249 LNCSGMLLGTQPI 261



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 4   RTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSC 63
           RT+Y + ID+ +T+  +   F S CG+V   R+ GD +   R AFVEF     A  AL+ 
Sbjct: 95  RTVYVSEIDQHVTEERLAALFSS-CGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNL 153

Query: 64  SGVILGSLPI 73
            G +LG  P+
Sbjct: 154 GGTVLGYYPV 163


>Glyma08g18810.2 
          Length = 285

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 66/73 (90%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           MC+RTIYCTNIDKK++Q++VKNFFES CGEV RLRLLGD  HSTRIAFVEF +AESAI A
Sbjct: 205 MCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESAIIA 264

Query: 61  LSCSGVILGSLPI 73
           L+CSG++LG+ PI
Sbjct: 265 LNCSGMLLGTQPI 277



 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 4   RTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSC 63
           RT+Y + ID+ +T+  +   F S CG+V   R+ GD +   R AFVEF     A  AL+ 
Sbjct: 111 RTVYVSEIDQHVTEERLAALFSS-CGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNL 169

Query: 64  SGVILGSLPI 73
            G +LG  P+
Sbjct: 170 GGTVLGYYPV 179


>Glyma06g14030.2 
          Length = 323

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/31 (93%), Positives = 31/31 (100%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEV 31
           MCSRTIYCTNIDKKLTQ+DVK+FFESICGEV
Sbjct: 287 MCSRTIYCTNIDKKLTQADVKHFFESICGEV 317



 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 1   MCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIAA 60
           M  RT+Y ++ID+ +T+  +   F + CG+V   R+ GD N   R AF+EF   E A AA
Sbjct: 190 MTRRTVYVSDIDQLVTEEQLAALFLN-CGQVVDCRVCGDPNSILRFAFIEFTDEEGARAA 248

Query: 61  LSCSGVILGSLPI 73
           L+ SG +LG  P+
Sbjct: 249 LNLSGTMLGYYPL 261