Miyakogusa Predicted Gene

Lj1g3v1063580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1063580.1 tr|Q5I7K5|Q5I7K5_WHEAT Ribosomal protein P1
OS=Triticum aestivum PE=1 SV=1,64.29,2e-19,60S ACIDIC RIBOSOMAL
PROTEIN FAMILY MEMBER,NULL; Ribosomal_60s,Ribosomal protein 60S;
seg,NULL,CUFF.26719.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14080.1                                                       101   2e-22
Glyma04g40720.1                                                       100   3e-22
Glyma03g42180.2                                                        87   3e-18
Glyma03g42180.3                                                        87   4e-18
Glyma03g42180.1                                                        87   4e-18
Glyma19g44920.2                                                        86   9e-18
Glyma19g44920.3                                                        85   2e-17
Glyma19g44920.1                                                        85   2e-17

>Glyma06g14080.1 
          Length = 111

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 54/61 (88%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          M +G  GCI ATLILHD+ IP+TAEKIN LLKA+NV+ ESYWPSLFAKLAQNKN++DL+L
Sbjct: 1  MDSGVQGCILATLILHDEEIPVTAEKINALLKASNVSAESYWPSLFAKLAQNKNIEDLIL 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma04g40720.1 
          Length = 110

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 54/61 (88%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          M +G  GCI ATLILHD+ IP+TAEKIN LLKA+NV+ ESYWPSLFAKLAQNKN++DL+L
Sbjct: 1  MDSGVQGCILATLILHDEEIPVTAEKINALLKASNVSAESYWPSLFAKLAQNKNIEDLIL 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma03g42180.2 
          Length = 99

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 49/61 (80%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          MS GE  C YA LILH+DGI +TA+KI+TLLK A V V+SYWP+LFAKLA+ KN+ DL+ 
Sbjct: 1  MSLGETACSYAALILHEDGISVTADKISTLLKTAKVPVDSYWPTLFAKLAEKKNLGDLIA 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma03g42180.3 
          Length = 112

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 49/61 (80%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          MS GE  C YA LILH+DGI +TA+KI+TLLK A V V+SYWP+LFAKLA+ KN+ DL+ 
Sbjct: 1  MSLGETACSYAALILHEDGISVTADKISTLLKTAKVPVDSYWPTLFAKLAEKKNLGDLIA 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma03g42180.1 
          Length = 164

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 49/61 (80%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          MS GE  C YA LILH+DGI +TA+KI+TLLK A V V+SYWP+LFAKLA+ KN+ DL+ 
Sbjct: 1  MSLGETACSYAALILHEDGISVTADKISTLLKTAKVPVDSYWPTLFAKLAEKKNLGDLIA 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma19g44920.2 
          Length = 99

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          MS GE  C YA LILH+DGI +TA+KI+TLL+ A V V++YWP+LFAKLA+ KN+ DL+ 
Sbjct: 1  MSLGETACSYAALILHEDGISVTADKISTLLETAKVQVDTYWPTLFAKLAEKKNLGDLIA 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma19g44920.3 
          Length = 113

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          MS GE  C YA LILH+DGI +TA+KI+TLL+ A V V++YWP+LFAKLA+ KN+ DL+ 
Sbjct: 1  MSLGETACSYAALILHEDGISVTADKISTLLETAKVQVDTYWPTLFAKLAEKKNLGDLIA 60

Query: 61 N 61
          N
Sbjct: 61 N 61


>Glyma19g44920.1 
          Length = 113

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 1  MSAGELGCIYATLILHDDGIPITAEKINTLLKAANVTVESYWPSLFAKLAQNKNVDDLVL 60
          MS GE  C YA LILH+DGI +TA+KI+TLL+ A V V++YWP+LFAKLA+ KN+ DL+ 
Sbjct: 1  MSLGETACSYAALILHEDGISVTADKISTLLETAKVQVDTYWPTLFAKLAEKKNLGDLIA 60

Query: 61 N 61
          N
Sbjct: 61 N 61