Miyakogusa Predicted Gene

Lj1g3v1032200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1032200.1 tr|A8JIG5|A8JIG5_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_180727 PE=4
SV=1,40.41,4e-18,Rhodanese,Rhodanese-like domain; Rhodanese Homology
Domain,Rhodanese-like domain; RHODANESE_3,Rhodan,CUFF.26677.1
         (235 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g41080.1                                                       329   2e-90
Glyma06g13770.1                                                       328   2e-90
Glyma14g26460.1                                                       239   2e-63
Glyma14g26450.1                                                        76   4e-14
Glyma01g30350.1                                                        50   1e-06

>Glyma04g41080.1 
          Length = 234

 Score =  329 bits (844), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 167/235 (71%), Positives = 178/235 (75%), Gaps = 1/235 (0%)

Query: 1   MAAFXXXXXXXXXXXXXXXXXXXXEGTREPNSWGVRERSCKTTTGQRLHSQKIARGLTIQ 60
           MAAF                    E TR+ NSW  R RS ++T G+    Q I RGLTIQ
Sbjct: 1   MAAFTSIVVQYSSTSSLQSLVPSLEATRDHNSWWGRVRSYRST-GKNSLQQNITRGLTIQ 59

Query: 61  SXXXXXXXXPAEEDWKIKRELLLQKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHP 120
           +        PAEEDWK+KRE LL+KRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHP
Sbjct: 60  NAATKPAKSPAEEDWKVKREYLLEKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHP 119

Query: 121 PDAINVQIYRLIKEWTAWDXXXXXXXXXXXXXXXTEENPEFIQSVEAKLNKNAKIIVACS 180
           PDAINVQIYRLIKEWTAWD               TEENPEFIQSVEAKL+KNAKIIVACS
Sbjct: 120 PDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQSVEAKLDKNAKIIVACS 179

Query: 181 SGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 235
           +GGTMKP+QNLPEGQQSRSLIAAYLLVL+GYTNVFHLEGGLYSWFKEDLPSVSEE
Sbjct: 180 AGGTMKPSQNLPEGQQSRSLIAAYLLVLDGYTNVFHLEGGLYSWFKEDLPSVSEE 234


>Glyma06g13770.1 
          Length = 234

 Score =  328 bits (842), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 168/235 (71%), Positives = 175/235 (74%), Gaps = 1/235 (0%)

Query: 1   MAAFXXXXXXXXXXXXXXXXXXXXEGTREPNSWGVRERSCKTTTGQRLHSQKIARGLTIQ 60
           MAAF                    E TR+ NSW  R RS K T    L  Q I RGLTIQ
Sbjct: 1   MAAFTSIAVQYSSTSSLQSLVPSLEATRDHNSWWGRVRSYKPTAKISLQ-QNITRGLTIQ 59

Query: 61  SXXXXXXXXPAEEDWKIKRELLLQKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHP 120
           +        PAEEDWK+KRE LL+KRVRSVDAKEAFRLQKEN FVILDVRPEAEFKEAHP
Sbjct: 60  NAATKPAKSPAEEDWKVKREYLLEKRVRSVDAKEAFRLQKENKFVILDVRPEAEFKEAHP 119

Query: 121 PDAINVQIYRLIKEWTAWDXXXXXXXXXXXXXXXTEENPEFIQSVEAKLNKNAKIIVACS 180
           PDAINVQIYRLIKEWTAWD               TEENPEFIQSVEAKL+KNAKIIVACS
Sbjct: 120 PDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQSVEAKLDKNAKIIVACS 179

Query: 181 SGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 235
           +GGTMKP+QNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE
Sbjct: 180 AGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 234


>Glyma14g26460.1 
          Length = 199

 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 121/176 (68%), Positives = 136/176 (77%), Gaps = 3/176 (1%)

Query: 25  EGTREPNSWGVRERSCKTTTGQRLHSQKIARGLTI--QSXXXXXXXXPAEEDWKIKRELL 82
           EG  + NSW VR RS K   GQRLH+Q IARGL I  QS        PAEEDWK+KRE L
Sbjct: 24  EGAHDHNSWWVRARSQKRI-GQRLHTQDIARGLRIKVQSAATKPAKSPAEEDWKVKREFL 82

Query: 83  LQKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDXXX 142
           LQKRVRSV+ KEA RLQKEN+FV+LDVRPEAEFKEAHPP AINVQIYRLIKEWTAWD   
Sbjct: 83  LQKRVRSVEVKEALRLQKENSFVLLDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIAR 142

Query: 143 XXXXXXXXXXXXTEENPEFIQSVEAKLNKNAKIIVACSSGGTMKPTQNLPEGQQSR 198
                       TEENPEFI++VEAK++K+AKIIVAC+SGGT++P+QNLPEGQQSR
Sbjct: 143 RAAFLFFGIFSGTEENPEFIKNVEAKIDKDAKIIVACTSGGTLRPSQNLPEGQQSR 198


>Glyma14g26450.1 
          Length = 37

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/37 (91%), Positives = 36/37 (97%)

Query: 199 SLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 235
           SLIAAYLLVLNGYTNVFHLEGGLY WFKE+LP+VSEE
Sbjct: 1   SLIAAYLLVLNGYTNVFHLEGGLYKWFKEELPTVSEE 37


>Glyma01g30350.1 
          Length = 216

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 29/164 (17%)

Query: 79  RELLLQKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIY--------- 129
           R+L+    VR +  K+A        FV+LDVRP  E ++A    +++V ++         
Sbjct: 43  RQLIESGTVRPILPKDASTAINSEGFVLLDVRPTWEREKARVAGSLHVPMFVEDTDNSPI 102

Query: 130 RLIKEWTAWDXXXXXXXXXXXXXXXTEENPEFIQSVEAKL-NKNAKIIVACSSGGTMKPT 188
            L+K+W  +                T  N EF+  VE  +  K AK++VAC         
Sbjct: 103 TLLKKWVHFG-----YIGLWTGQYLTTLNSEFLSQVENAIPGKEAKLLVAC--------- 148

Query: 189 QNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSV 232
                G+  RS+ AA  L   GY N+  L GG       D P+V
Sbjct: 149 -----GEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKNNDFPAV 187