Miyakogusa Predicted Gene

Lj1g3v1020030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1020030.1 Non Chatacterized Hit- tr|I1ICQ5|I1ICQ5_BRADI
Uncharacterized protein (Fragment) OS=Brachypodium
dis,54.32,4e-19,FBOX,F-box domain, cyclin-like; no description,NULL;
F-box domain,F-box domain, cyclin-like; A
Recep,NODE_58450_length_878_cov_48.274487.path2.1
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g41100.1                                                       271   3e-73
Glyma06g13750.1                                                       263   8e-71

>Glyma04g41100.1 
          Length = 165

 Score =  271 bits (693), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 130/166 (78%), Positives = 145/166 (87%), Gaps = 1/166 (0%)

Query: 1   MEGLPLEICMNIFCFLDYQHLAVAQQVCKKWKVMASENAIWSNLFLERWGGDRADFYAPT 60
           ME LPLEICM IFC LDYQHLAVAQQVC+KWK++AS+N +WSNLF ERWG D A FYAP 
Sbjct: 1   MEMLPLEICMKIFCLLDYQHLAVAQQVCRKWKLVASDNTLWSNLFKERWGEDHAAFYAPM 60

Query: 61  GSKSWKDVYEVQDRCDRVGVGLKIIREGCDYYLVHLGEIQQYLGSRKNREQATSQSCHTS 120
           GSKSWKDVYEVQDRCDR+G+G+KIIREG DYYLVH GEIQ++LGSRKN E+ T  + HT 
Sbjct: 61  GSKSWKDVYEVQDRCDRIGLGMKIIREGIDYYLVHQGEIQRHLGSRKNHEKETGHNSHTL 120

Query: 121 SSEKRDLSGEGSLAEERSCRGILDRILFFIGDLEVASAGAKRSRLI 166
           +SE  D +GEGSLAEERSCRGILDRILFFIGDLEVASA AKRSR+I
Sbjct: 121 NSEI-DFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165


>Glyma06g13750.1 
          Length = 165

 Score =  263 bits (671), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 128/166 (77%), Positives = 143/166 (86%), Gaps = 1/166 (0%)

Query: 1   MEGLPLEICMNIFCFLDYQHLAVAQQVCKKWKVMASENAIWSNLFLERWGGDRADFYAPT 60
           ME LPLEICM IF  LDYQHLAVAQQVC+KWK++ASENA+WS+LF ERWG D A FYAP 
Sbjct: 1   MERLPLEICMKIFYLLDYQHLAVAQQVCRKWKLVASENALWSDLFKERWGEDHAAFYAPV 60

Query: 61  GSKSWKDVYEVQDRCDRVGVGLKIIREGCDYYLVHLGEIQQYLGSRKNREQATSQSCHTS 120
           GSKSWKDVYEVQDRCDR+GVGLKIIREG DYYL+H GEIQ++LGSRKN E+      +T 
Sbjct: 61  GSKSWKDVYEVQDRCDRIGVGLKIIREGIDYYLIHQGEIQRHLGSRKNHEKEIGHCSNTL 120

Query: 121 SSEKRDLSGEGSLAEERSCRGILDRILFFIGDLEVASAGAKRSRLI 166
           +SE  + +GEGSLAEERSCRGILDRILFFIGDLEVASA AKRSR+I
Sbjct: 121 NSES-NFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165