Miyakogusa Predicted Gene

Lj1g3v0969950.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969950.4 Non Chatacterized Hit- tr|C6TJR8|C6TJR8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25564
PE,83.5,0,Ribulose-phoshate binding barrel,Ribulose-phosphate binding
barrel; SUBFAMILY NOT NAMED,NULL; 1-(5-P,CUFF.26721.4
         (308 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06120.1                                                       493   e-139
Glyma13g22110.1                                                       202   4e-52
Glyma10g08460.1                                                       145   5e-35
Glyma16g24880.1                                                       143   3e-34

>Glyma02g06120.1 
          Length = 300

 Score =  493 bits (1269), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/307 (82%), Positives = 270/307 (87%), Gaps = 8/307 (2%)

Query: 1   MRNLASAPSSLNFPIFHPNKLRSATLNPXXXXXXXXXXXIQC-AVRFCPCIDIHKGKVKQ 59
           MRNLA AP SL   IF PNK    TL             IQC AV+F PCIDIHKGKVKQ
Sbjct: 1   MRNLA-APHSLGVFIFRPNKPPFLTL---PSLSRRSLPSIQCGAVQFRPCIDIHKGKVKQ 56

Query: 60  IVGSTLEDLKGDGGSEPVTNFESDKSAAEYATLYKQDGLTGGHVIMLGADPLSKAAAFEA 119
           IVGSTL+DLKG   S+PVTNFESDKSAAEYATLYKQDGLTGGHVIMLGADPLSKAAA +A
Sbjct: 57  IVGSTLQDLKG---SDPVTNFESDKSAAEYATLYKQDGLTGGHVIMLGADPLSKAAALQA 113

Query: 120 LHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDLGRLKDLVRIVGKERLV 179
           LHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMD+GRLKDLV+IVGKERLV
Sbjct: 114 LHAYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDIGRLKDLVQIVGKERLV 173

Query: 180 LDLSCRKKDGKYAIVTDRWQKFSDVSLDAEVMEFLASFADEFLVHGVDVEGKKLGIDEEL 239
           LDLSCRKKDGKYAIVTDRWQKFSDV +D +VMEFLA+FADEFLVHGVDVEGKKLGIDEEL
Sbjct: 174 LDLSCRKKDGKYAIVTDRWQKFSDVFVDPDVMEFLANFADEFLVHGVDVEGKKLGIDEEL 233

Query: 240 VALLGKHSPIPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQEVVAWHN 299
           VALLGK+S IPVTYAGGVT +ADLERI+TAGM RV+VTVGSALDIFGG+LAY++VVAWH 
Sbjct: 234 VALLGKYSTIPVTYAGGVTEMADLERIRTAGMERVNVTVGSALDIFGGNLAYEDVVAWHA 293

Query: 300 HQKASVV 306
            Q ASVV
Sbjct: 294 QQNASVV 300


>Glyma13g22110.1 
          Length = 134

 Score =  202 bits (514), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/140 (74%), Positives = 118/140 (84%), Gaps = 13/140 (9%)

Query: 161 MDLGRLKDLVRIVGKERLVLDLSCRKKDGKYAIVTDRWQKFSDVSLDAEVMEFLASFADE 220
           MDLGRLKDLV+IVGK+RLVLDLSCRKKDGKYAIVTDRWQKFSDV +D +VMEFLA+FADE
Sbjct: 1   MDLGRLKDLVQIVGKDRLVLDLSCRKKDGKYAIVTDRWQKFSDVFVDPDVMEFLANFADE 60

Query: 221 FLVHGVDVEGKKLGIDEELVALLGKH-------SPIPVTYAGGVTVLADLERIKTAGMGR 273
           FLVHGVDVEGKK      +    G++       + IPVTYAGGVT ++DLERIKTAGM R
Sbjct: 61  FLVHGVDVEGKK------VTECTGRNKTTEENGNQIPVTYAGGVTEMSDLERIKTAGMDR 114

Query: 274 VDVTVGSALDIFGGSLAYQE 293
           V+VTVGSALDIFGG+LAY+E
Sbjct: 115 VNVTVGSALDIFGGNLAYEE 134


>Glyma10g08460.1 
          Length = 213

 Score =  145 bits (366), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/133 (63%), Positives = 91/133 (68%), Gaps = 21/133 (15%)

Query: 122 AYPGGLQVGGGINSDNCLSYIEEGASHVIVTSYVFNNGQMDLGRLKDLVRIVGKERLVLD 181
            + G LQVGGGINSDNCLS IEEGASHVIVTSYVFNNGQMDL RLKDLV+IVGKERLVLD
Sbjct: 13  VFYGCLQVGGGINSDNCLSCIEEGASHVIVTSYVFNNGQMDLERLKDLVQIVGKERLVLD 72

Query: 182 LSCRKK----DGKYAIV-TDRW--------QKFSDVS--------LDAEVMEFLASFADE 220
           LSCRK     +G      T  W         + S +         +D  V EFLA+FADE
Sbjct: 73  LSCRKNSVLAEGSVCNQETHSWFSLLGMVNMQLSLIDGRSSVMFFVDPHVTEFLANFADE 132

Query: 221 FLVHGVDVEGKKL 233
           FLVHGVDVEGK L
Sbjct: 133 FLVHGVDVEGKNL 145


>Glyma16g24880.1 
          Length = 101

 Score =  143 bits (360), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 83/111 (74%), Gaps = 20/111 (18%)

Query: 40  IQCAVRFCPCIDIHKGKVKQIVGSTLEDLKGDGGSEPVTNFESDKSAAEYATLYKQDGLT 99
           IQCAV+F PCIDIHKGKVKQIVGSTL+DLKG   S+PVTNFESD          K D   
Sbjct: 11  IQCAVQFRPCIDIHKGKVKQIVGSTLQDLKG---SDPVTNFESDN---------KMDSQV 58

Query: 100 GGHVIMLGADPLSKAAAFEALHAYPGGLQVGGGINSDNCLSYIEEGASHVI 150
                   ADP SKA+A EALHAYPGGLQVGGG+NS+NCLSYIE+GASHVI
Sbjct: 59  --------ADPFSKASALEALHAYPGGLQVGGGLNSENCLSYIEKGASHVI 101