Miyakogusa Predicted Gene

Lj1g3v0969940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0969940.1 Non Chatacterized Hit- tr|C6TJR8|C6TJR8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25564
PE,81.03,5e-19,SUBFAMILY NOT NAMED,NULL;
1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO]
IMIDAZOLE,CUFF.26720.1
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06120.1                                                        99   1e-21
Glyma13g22110.1                                                        83   5e-17

>Glyma02g06120.1 
          Length = 300

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/58 (81%), Positives = 53/58 (91%)

Query: 8   IPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQEVVAWHNHQKASVV 65
           IPVTYAGGVT +ADLERI+TAGM RV+VTVGSALDIFGG+LAY++VVAWH  Q ASVV
Sbjct: 243 IPVTYAGGVTEMADLERIRTAGMERVNVTVGSALDIFGGNLAYEDVVAWHAQQNASVV 300


>Glyma13g22110.1 
          Length = 134

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 44/46 (95%)

Query: 7   QIPVTYAGGVTVLADLERIKTAGMGRVDVTVGSALDIFGGSLAYQE 52
           QIPVTYAGGVT ++DLERIKTAGM RV+VTVGSALDIFGG+LAY+E
Sbjct: 89  QIPVTYAGGVTEMSDLERIKTAGMDRVNVTVGSALDIFGGNLAYEE 134