Miyakogusa Predicted Gene

Lj1g3v0968900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0968900.1 tr|G7J6T9|G7J6T9_MEDTR Phosphomevalonate kinase
OS=Medicago truncatula GN=MTR_3g091190 PE=3 SV=1,88.71,0,Ribosomal
protein S5 domain 2-like,Ribosomal protein S5 domain 2-type fold; no
description,Ribosomal,CUFF.26685.1
         (507 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g41570.1                                                       725   0.0  
Glyma06g13260.1                                                       711   0.0  

>Glyma04g41570.1 
          Length = 508

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/505 (71%), Positives = 390/505 (77%)

Query: 3   VVASAPGKVLMTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWAWGWTDVKLTS 62
           VV+SAPGKVLMTGGYLILERPNAGLVLST+ARFYAI+KP H +IKPD+WAW WTDV+LTS
Sbjct: 4   VVSSAPGKVLMTGGYLILERPNAGLVLSTNARFYAIVKPIHHEIKPDSWAWAWTDVRLTS 63

Query: 63  PQLSREALYKLALNNLTIQNVSSCESRNPFXXXXXXXXXXXXXXTFXXXXXXXXXXXXXX 122
           PQLSREALYKLAL NLTIQ VS  ++RNPF              TF              
Sbjct: 64  PQLSREALYKLALKNLTIQTVSPSDTRNPFVEYAVQYSVAAAYATFDHNKKELLHKLLLH 123

Query: 123 XXXITILGSNDFYSYRNEIEKRGLPLTPESLATLPPFAFISFNTDDAIEGSCKPEVAKTG 182
              ITILG NDFYSYRNEIE+RGLPLTPESLATLPPF+ I+FNTDDA  G+CKPEVAKTG
Sbjct: 124 GLDITILGGNDFYSYRNEIERRGLPLTPESLATLPPFSSITFNTDDADGGNCKPEVAKTG 183

Query: 183 LGXXXXXXXXXXXXXXHYLGVVELSSTKDHGNRKDIADLDLVHKIAQTAHCVAQGKVGSG 242
           LG              HYL VV+LSS+KDH  RKD+ADLD+VHKIAQTAHC+AQGKVGSG
Sbjct: 184 LGSSAAMTMAVVAALLHYLDVVKLSSSKDHRERKDVADLDMVHKIAQTAHCIAQGKVGSG 243

Query: 243 FDVSSAVYGSHRYVRFSPEVIXXXXXXXXXXPLPEVITDILKGNWDHDRTEFXXXXXXXX 302
           FDVSSAVYGS RYVRFSPEVI          PL + IT+I+KGNWDHD TEF        
Sbjct: 244 FDVSSAVYGSQRYVRFSPEVISSTKVADIAVPLSDGITEIIKGNWDHDTTEFSLPPLMSL 303

Query: 303 XXXXXXXXXXXXXXMVGAVKKWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWD 362
                         MVGAVKKWQKSDPQKSLDTW RLSEANSALE+QLNLLSKLAKEQW+
Sbjct: 304 LLGEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWTRLSEANSALEMQLNLLSKLAKEQWN 363

Query: 363 AYKSVIDSCSILRSDKWIEQASEPVKEAVIKALLGARDAMLGIRYHMRLMGEASGVPIEP 422
           AYKSVIDSCS+LR DKWIEQASEP KEAVIKALLGA++AMLGIRYHMRLMGEA+GVPIEP
Sbjct: 364 AYKSVIDSCSMLRPDKWIEQASEPNKEAVIKALLGAKEAMLGIRYHMRLMGEAAGVPIEP 423

Query: 423 ETQTQLLDATMNLEXXXXXXXXXXXXYDAVFAVTLGDSSSNVTKVWGSLNVLAMLVKEDP 482
           E QTQLLDATMNLE            +DAVFAVTLGDSSSNVTKVW SLNVLA+LVKEDP
Sbjct: 424 EPQTQLLDATMNLEGVLLAGVPGAGGFDAVFAVTLGDSSSNVTKVWSSLNVLALLVKEDP 483

Query: 483 CGVSLESADPRTNEITSAVSSIHIE 507
           CGV LE ADPRTN ITSAVSSIHIE
Sbjct: 484 CGVCLEKADPRTNGITSAVSSIHIE 508


>Glyma06g13260.1 
          Length = 508

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/505 (70%), Positives = 386/505 (76%)

Query: 3   VVASAPGKVLMTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWAWGWTDVKLTS 62
           VV SAPGKVLMTGGYLILERPN GLVLST+ARFYAIIKP H +IKPD+WAW WTD++LTS
Sbjct: 4   VVTSAPGKVLMTGGYLILERPNPGLVLSTNARFYAIIKPIHHEIKPDSWAWAWTDIRLTS 63

Query: 63  PQLSREALYKLALNNLTIQNVSSCESRNPFXXXXXXXXXXXXXXTFXXXXXXXXXXXXXX 122
           PQL R+ALYKLAL NL IQ VS  ++RNPF              TF              
Sbjct: 64  PQLCRQALYKLALKNLAIQTVSPSDTRNPFVEYAIQYSVAAAYATFDQNKKELLHKLLLH 123

Query: 123 XXXITILGSNDFYSYRNEIEKRGLPLTPESLATLPPFAFISFNTDDAIEGSCKPEVAKTG 182
              ITILG NDFYSYRNEIE+RGLPLTPESLATL PF+ I+FNTDDA  GSCKPEVAKTG
Sbjct: 124 GLDITILGGNDFYSYRNEIERRGLPLTPESLATLLPFSSITFNTDDADGGSCKPEVAKTG 183

Query: 183 LGXXXXXXXXXXXXXXHYLGVVELSSTKDHGNRKDIADLDLVHKIAQTAHCVAQGKVGSG 242
           LG              HYL VV+LSS+KDH  RKD+ADLD+VHKIAQTAHC+AQGKVGSG
Sbjct: 184 LGSSAAMTTAVVAALLHYLDVVKLSSSKDHWERKDVADLDMVHKIAQTAHCIAQGKVGSG 243

Query: 243 FDVSSAVYGSHRYVRFSPEVIXXXXXXXXXXPLPEVITDILKGNWDHDRTEFXXXXXXXX 302
           FDVSSAVYGS RYVRFSPEVI          PLP+ IT+I+KGNWDHD  EF        
Sbjct: 244 FDVSSAVYGSQRYVRFSPEVISSTKVGDIAVPLPDSITEIIKGNWDHDTAEFSLPPLMTL 303

Query: 303 XXXXXXXXXXXXXXMVGAVKKWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWD 362
                         MVGAVKKWQKSDPQKSLDTWRRLSEANSALE+QLNLLSKLAKEQW+
Sbjct: 304 LLGEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWRRLSEANSALEMQLNLLSKLAKEQWN 363

Query: 363 AYKSVIDSCSILRSDKWIEQASEPVKEAVIKALLGARDAMLGIRYHMRLMGEASGVPIEP 422
           AYKSVIDSCS+LRSDKWIEQASEP KEA+IKALLGA++AMLGIRY M  MGEA+GVPIEP
Sbjct: 364 AYKSVIDSCSMLRSDKWIEQASEPNKEAIIKALLGAKEAMLGIRYRMSQMGEAAGVPIEP 423

Query: 423 ETQTQLLDATMNLEXXXXXXXXXXXXYDAVFAVTLGDSSSNVTKVWGSLNVLAMLVKEDP 482
           E+QTQLLDAT+NLE            +DAVFAVTLGDSSSNVTK+W SLNVLA+LVKEDP
Sbjct: 424 ESQTQLLDATVNLEGVLLAGVPGAGGFDAVFAVTLGDSSSNVTKIWSSLNVLALLVKEDP 483

Query: 483 CGVSLESADPRTNEITSAVSSIHIE 507
           CGV LE ADPRTNEITSAVSSIHI+
Sbjct: 484 CGVCLEKADPRTNEITSAVSSIHIQ 508