Miyakogusa Predicted Gene

Lj1g3v0948590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948590.1 Non Chatacterized Hit- tr|H9VTY4|H9VTY4_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,69.49,1e-17,Bac_globin,Globin, truncated bacterial-like; no
description,Globin, structural domain,CUFF.26551.1
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g20380.1                                                       285   1e-77
Glyma04g08380.2                                                       275   2e-74
Glyma04g08380.1                                                       240   4e-64
Glyma06g08500.1                                                        92   3e-19
Glyma14g34270.1                                                        57   6e-09
Glyma03g13800.1                                                        57   6e-09

>Glyma14g20380.1 
          Length = 169

 Score =  285 bits (729), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 143/164 (87%), Positives = 151/164 (92%)

Query: 1   MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEEWFRSIFA 60
           MQSLQ KASEWSGV  D+AF IDDTNLF KLGLQTFINLSTNFYNRVYDD+EEWFRSIFA
Sbjct: 1   MQSLQQKASEWSGVSIDDAFGIDDTNLFQKLGLQTFINLSTNFYNRVYDDEEEWFRSIFA 60

Query: 61  DSEKQNAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHEAAERWLHHMQQALD 120
           +SEK+NAIQNQYEFFVQRMGGPPLFSQRRGHPALI RHRPFPVTH+AAERWLHHMQ ALD
Sbjct: 61  NSEKENAIQNQYEFFVQRMGGPPLFSQRRGHPALIARHRPFPVTHQAAERWLHHMQHALD 120

Query: 121 STPDIDDDSKIKMQNFFRHTAYFLVAGNELKKQNEQMPCKHAAG 164
           ST DIDDDSK KM NFFRHTAYFLVAG+ELK QN+ +PCKHAA 
Sbjct: 121 STTDIDDDSKTKMMNFFRHTAYFLVAGDELKNQNQHIPCKHAAA 164


>Glyma04g08380.2 
          Length = 172

 Score =  275 bits (703), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 131/163 (80%), Positives = 141/163 (86%)

Query: 1   MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEEWFRSIFA 60
           MQSLQ KASEWSGV   +AFAID+ NLF KLGLQT +NLSTNFYNRVYDDD+EWFRSIFA
Sbjct: 1   MQSLQQKASEWSGVSIADAFAIDEANLFHKLGLQTLVNLSTNFYNRVYDDDQEWFRSIFA 60

Query: 61  DSEKQNAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHEAAERWLHHMQQALD 120
           +S+KQNAIQNQ EF VQRMGGP L+SQRRGHPALI RHRPFP+THEAA RWLHHM QALD
Sbjct: 61  NSDKQNAIQNQIEFLVQRMGGPTLYSQRRGHPALIARHRPFPLTHEAANRWLHHMGQALD 120

Query: 121 STPDIDDDSKIKMQNFFRHTAYFLVAGNELKKQNEQMPCKHAA 163
           ST  IDDDSKIK+ NFFRHTAYFLVAG E K QN  +PCK AA
Sbjct: 121 STSAIDDDSKIKLINFFRHTAYFLVAGVEQKDQNFHVPCKDAA 163


>Glyma04g08380.1 
          Length = 188

 Score =  240 bits (613), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 113/138 (81%), Positives = 122/138 (88%)

Query: 1   MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEEWFRSIFA 60
           MQSLQ KASEWSGV   +AFAID+ NLF KLGLQT +NLSTNFYNRVYDDD+EWFRSIFA
Sbjct: 1   MQSLQQKASEWSGVSIADAFAIDEANLFHKLGLQTLVNLSTNFYNRVYDDDQEWFRSIFA 60

Query: 61  DSEKQNAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHEAAERWLHHMQQALD 120
           +S+KQNAIQNQ EF VQRMGGP L+SQRRGHPALI RHRPFP+THEAA RWLHHM QALD
Sbjct: 61  NSDKQNAIQNQIEFLVQRMGGPTLYSQRRGHPALIARHRPFPLTHEAANRWLHHMGQALD 120

Query: 121 STPDIDDDSKIKMQNFFR 138
           ST  IDDDSKIK+ NFFR
Sbjct: 121 STSAIDDDSKIKLINFFR 138


>Glyma06g08500.1 
          Length = 109

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 84/158 (53%), Gaps = 50/158 (31%)

Query: 1   MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEEWFRSIFA 60
           MQSLQHKASEWSGV + +AF ID+     K  L + + +ST     +YDD+EEWFRSIFA
Sbjct: 1   MQSLQHKASEWSGVSTADAFTIDEA---FKPWLPS-LPISTT--GCIYDDEEEWFRSIFA 54

Query: 61  DSEKQNAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHEAAERWLHHMQQALD 120
           +S+ Q                                             WLHHM QALD
Sbjct: 55  NSQNQ--------------------------------------------EWLHHMAQALD 70

Query: 121 STPDIDDDSKIKMQNFFRHTAYFLVAGNELKKQNEQMP 158
           ST DIDDDSKIK+ NFF +TAYFLVAG E + QN   P
Sbjct: 71  STSDIDDDSKIKLINFFSYTAYFLVAGVEQQDQNLHTP 108


>Glyma14g34270.1 
          Length = 34

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 30/33 (90%)

Query: 47 VYDDDEEWFRSIFADSEKQNAIQNQYEFFVQRM 79
          VYDD++EWFRSIFA+ +KQNAIQNQ EF VQRM
Sbjct: 1  VYDDEQEWFRSIFANFDKQNAIQNQIEFLVQRM 33


>Glyma03g13800.1 
          Length = 34

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 30/33 (90%)

Query: 47 VYDDDEEWFRSIFADSEKQNAIQNQYEFFVQRM 79
          VYDD++EWFRSIFA+ +KQNAIQNQ EF VQRM
Sbjct: 1  VYDDEQEWFRSIFANFDKQNAIQNQIEFLVQRM 33