Miyakogusa Predicted Gene

Lj1g3v0948490.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948490.2 Non Chatacterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.44,3e-18,seg,NULL,CUFF.26552.2
         (393 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g08800.1                                                       260   2e-69
Glyma13g08430.1                                                       185   8e-47
Glyma06g13070.1                                                        66   8e-11
Glyma14g31640.1                                                        65   1e-10

>Glyma13g08800.1 
          Length = 259

 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/275 (55%), Positives = 185/275 (67%), Gaps = 29/275 (10%)

Query: 126 LKRTHIQ---KASADRVAMSEDSSLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIHNDK 182
           L RT  Q   + S+D+V     SS PA ISED+KVTD+V + RRRL PLR+C  K  +DK
Sbjct: 6   LFRTLYQIGREPSSDQVRPDLSSSPPANISEDNKVTDSV-MTRRRLWPLRKCARKSQDDK 64

Query: 183 MSSRRRHRAKHQQSVPANNDQSVE-----DLSDGEEESTGXXXXXXXXXXXXXCEVTCSK 237
           +SS R  +AK+QQS+P N+D   E       S+GE  S               CE     
Sbjct: 65  ISSCRPRKAKNQQSIPTNDDADDESEEDLSYSEGENMS----DFIVDDSDVSNCE----- 115

Query: 238 SSRDEFNSDVDSASSNLQDVSDGEMNFGKILSKIQRRKKNAMKWEYQADMLAEFGKDSEL 297
                     D++S++  DVSD +M+FG ILSKIQR K N MKWE++ADMLA FGKD EL
Sbjct: 116 ----------DTSSTSQDDVSDEDMDFGNILSKIQRSKTN-MKWEFEADMLAAFGKDPEL 164

Query: 298 CMKAVCSLYKQQTSEEQMSKESMCHNNRGFSKCDAPRGSDLGEYLTEGDPSGGLKKSVEE 357
           CMKAVC+LY+QQTSEEQMSK ++  N RGF+K DA +GS L E+LT+GDP GGLKKSV+E
Sbjct: 165 CMKAVCALYRQQTSEEQMSKGALLSNQRGFNKFDAYKGSILAEFLTDGDPYGGLKKSVKE 224

Query: 358 LQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFF 392
           LQE DPEAVE CR+LAT YSKQLYEIYKN EDP F
Sbjct: 225 LQENDPEAVELCRSLATHYSKQLYEIYKNKEDPLF 259


>Glyma13g08430.1 
          Length = 127

 Score =  185 bits (469), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 106/126 (84%), Gaps = 1/126 (0%)

Query: 261 EMNFGKILSKIQRRKKNAMKWEYQADMLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESM 320
           +M+FGKILSKIQR K N MKWE++A MLA FGKD ELCMKAVC+LY+QQTS EQ+SK ++
Sbjct: 2   DMDFGKILSKIQRSKTN-MKWEFEAGMLAAFGKDPELCMKAVCALYRQQTSVEQLSKGAL 60

Query: 321 CHNNRGFSKCDAPRGSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVEECRTLATRYSKQL 380
             N RGF+K DA +GS L E+LT+GDP GGLKKS++ELQE D +AVE CR+LAT YSKQL
Sbjct: 61  LSNQRGFNKFDAYKGSILAEFLTDGDPYGGLKKSMKELQENDQKAVELCRSLATHYSKQL 120

Query: 381 YEIYKN 386
           YEIYKN
Sbjct: 121 YEIYKN 126


>Glyma06g13070.1 
          Length = 41

 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 33/40 (82%)

Query: 335 GSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVEECRTLAT 374
           GS L E+L  GDP GGLKKSV+ELQEYDP+AVE+CRT A 
Sbjct: 1   GSTLAEFLNHGDPRGGLKKSVKELQEYDPKAVEQCRTFAI 40


>Glyma14g31640.1 
          Length = 78

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/36 (77%), Positives = 32/36 (88%)

Query: 358 LQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFFP 393
           +QE DPEAVE C++LAT YSK+LYEIYKN EDPFFP
Sbjct: 42  IQEKDPEAVELCKSLATHYSKKLYEIYKNKEDPFFP 77