Miyakogusa Predicted Gene
- Lj1g3v0948490.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0948490.2 Non Chatacterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.44,3e-18,seg,NULL,CUFF.26552.2
(393 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g08800.1 260 2e-69
Glyma13g08430.1 185 8e-47
Glyma06g13070.1 66 8e-11
Glyma14g31640.1 65 1e-10
>Glyma13g08800.1
Length = 259
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/275 (55%), Positives = 185/275 (67%), Gaps = 29/275 (10%)
Query: 126 LKRTHIQ---KASADRVAMSEDSSLPAAISEDDKVTDNVKIRRRRLQPLRECLSKIHNDK 182
L RT Q + S+D+V SS PA ISED+KVTD+V + RRRL PLR+C K +DK
Sbjct: 6 LFRTLYQIGREPSSDQVRPDLSSSPPANISEDNKVTDSV-MTRRRLWPLRKCARKSQDDK 64
Query: 183 MSSRRRHRAKHQQSVPANNDQSVE-----DLSDGEEESTGXXXXXXXXXXXXXCEVTCSK 237
+SS R +AK+QQS+P N+D E S+GE S CE
Sbjct: 65 ISSCRPRKAKNQQSIPTNDDADDESEEDLSYSEGENMS----DFIVDDSDVSNCE----- 115
Query: 238 SSRDEFNSDVDSASSNLQDVSDGEMNFGKILSKIQRRKKNAMKWEYQADMLAEFGKDSEL 297
D++S++ DVSD +M+FG ILSKIQR K N MKWE++ADMLA FGKD EL
Sbjct: 116 ----------DTSSTSQDDVSDEDMDFGNILSKIQRSKTN-MKWEFEADMLAAFGKDPEL 164
Query: 298 CMKAVCSLYKQQTSEEQMSKESMCHNNRGFSKCDAPRGSDLGEYLTEGDPSGGLKKSVEE 357
CMKAVC+LY+QQTSEEQMSK ++ N RGF+K DA +GS L E+LT+GDP GGLKKSV+E
Sbjct: 165 CMKAVCALYRQQTSEEQMSKGALLSNQRGFNKFDAYKGSILAEFLTDGDPYGGLKKSVKE 224
Query: 358 LQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFF 392
LQE DPEAVE CR+LAT YSKQLYEIYKN EDP F
Sbjct: 225 LQENDPEAVELCRSLATHYSKQLYEIYKNKEDPLF 259
>Glyma13g08430.1
Length = 127
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 106/126 (84%), Gaps = 1/126 (0%)
Query: 261 EMNFGKILSKIQRRKKNAMKWEYQADMLAEFGKDSELCMKAVCSLYKQQTSEEQMSKESM 320
+M+FGKILSKIQR K N MKWE++A MLA FGKD ELCMKAVC+LY+QQTS EQ+SK ++
Sbjct: 2 DMDFGKILSKIQRSKTN-MKWEFEAGMLAAFGKDPELCMKAVCALYRQQTSVEQLSKGAL 60
Query: 321 CHNNRGFSKCDAPRGSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVEECRTLATRYSKQL 380
N RGF+K DA +GS L E+LT+GDP GGLKKS++ELQE D +AVE CR+LAT YSKQL
Sbjct: 61 LSNQRGFNKFDAYKGSILAEFLTDGDPYGGLKKSMKELQENDQKAVELCRSLATHYSKQL 120
Query: 381 YEIYKN 386
YEIYKN
Sbjct: 121 YEIYKN 126
>Glyma06g13070.1
Length = 41
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 335 GSDLGEYLTEGDPSGGLKKSVEELQEYDPEAVEECRTLAT 374
GS L E+L GDP GGLKKSV+ELQEYDP+AVE+CRT A
Sbjct: 1 GSTLAEFLNHGDPRGGLKKSVKELQEYDPKAVEQCRTFAI 40
>Glyma14g31640.1
Length = 78
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 358 LQEYDPEAVEECRTLATRYSKQLYEIYKNNEDPFFP 393
+QE DPEAVE C++LAT YSK+LYEIYKN EDPFFP
Sbjct: 42 IQEKDPEAVELCKSLATHYSKKLYEIYKNKEDPFFP 77