Miyakogusa Predicted Gene

Lj1g3v0948480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0948480.1 CUFF.26545.1
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g13060.1                                                        72   9e-14
Glyma14g31650.1                                                        72   2e-13
Glyma13g08400.1                                                        57   5e-09
Glyma11g02130.1                                                        50   4e-07
Glyma04g41720.1                                                        49   1e-06

>Glyma06g13060.1 
          Length = 63

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 41/61 (67%)

Query: 4  VSGASFRVVVFLGLIYAALMSVACSQSTAPAPAPTSDGTSIDQXXXXXXXXXXXXXTYLI 63
          VS AS RVV FL LI AALM+VA SQ TAPAPAPTSDGT+IDQ             TY++
Sbjct: 3  VSSASLRVVAFLSLILAALMTVASSQVTAPAPAPTSDGTTIDQAVAYVLMLVALVLTYIM 62

Query: 64 H 64
          H
Sbjct: 63 H 63


>Glyma14g31650.1 
          Length = 59

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 39/55 (70%)

Query: 10 RVVVFLGLIYAALMSVACSQSTAPAPAPTSDGTSIDQXXXXXXXXXXXXXTYLIH 64
          RVVVFLGLI A L+S+ACSQS APAPAPTSDGTSIDQ             TY++H
Sbjct: 5  RVVVFLGLILATLVSLACSQSAAPAPAPTSDGTSIDQTVAYILMLVALVLTYIMH 59


>Glyma13g08400.1 
          Length = 61

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 10 RVVVFLGLIYAALMSVACSQSTA--PAPAPTSDGTSIDQXXXXXXXXXXXXXTYLIH 64
          +VVVFLGLI AALMSVACSQS A  PAPAPTSDGTSIDQ             TY++H
Sbjct: 5  KVVVFLGLILAALMSVACSQSAAPAPAPAPTSDGTSIDQAVAYVLMLVALVLTYIMH 61


>Glyma11g02130.1 
          Length = 72

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 13 VFLGLIYAALMSVAC-SQSTAPAPAPTSDGTSIDQXXXXXXXXXXXXXTYLIH 64
          V L LI+   M VA  +QS APAPAPTSDGTSIDQ             TYLIH
Sbjct: 16 VVLSLIFTLYMPVAVHAQSLAPAPAPTSDGTSIDQGIAYVLMMLALALTYLIH 68


>Glyma04g41720.1 
          Length = 63

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 41/61 (67%)

Query: 4  VSGASFRVVVFLGLIYAALMSVACSQSTAPAPAPTSDGTSIDQXXXXXXXXXXXXXTYLI 63
          +S ASFRVV FL L+ AALM++A SQ TAPAPAP SDGT+IDQ             TY++
Sbjct: 3  ISSASFRVVAFLSLLLAALMTLASSQVTAPAPAPASDGTTIDQAVAYVLMLAALVLTYIM 62

Query: 64 H 64
          H
Sbjct: 63 H 63