Miyakogusa Predicted Gene

Lj1g3v0913120.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0913120.1 Non Chatacterized Hit- tr|A2ZR97|A2ZR97_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,68.25,6e-19,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.26520.1
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g12890.1                                                       178   1e-45
Glyma06g12890.2                                                       177   2e-45
Glyma06g12900.1                                                       171   3e-43
Glyma13g34420.1                                                       120   4e-28
Glyma12g35960.1                                                        88   3e-18
Glyma06g12890.3                                                        77   5e-15

>Glyma06g12890.1 
          Length = 237

 Score =  178 bits (451), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 96/119 (80%)

Query: 1   MASPSVEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTL 60
           MA  +V +D YR+YL  D EKNTKWR+GAPPNY+ VNKL+EEGRTK WP GSLEEQVQ+L
Sbjct: 1   MALSNVREDNYRSYLREDTEKNTKWRYGAPPNYDVVNKLYEEGRTKVWPQGSLEEQVQSL 60

Query: 61  VKNWEMEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQKL 119
           VKNWEME FHKVD+ DFRSIDPKK+TFSLNGRKPM+          YIPMLQT +P+K+
Sbjct: 61  VKNWEMEMFHKVDLQDFRSIDPKKYTFSLNGRKPMTLEEMMKLGGGYIPMLQTSIPEKM 119


>Glyma06g12890.2 
          Length = 193

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 96/119 (80%)

Query: 1   MASPSVEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTL 60
           MA  +V +D YR+YL  D EKNTKWR+GAPPNY+ VNKL+EEGRTK WP GSLEEQVQ+L
Sbjct: 1   MALSNVREDNYRSYLREDTEKNTKWRYGAPPNYDVVNKLYEEGRTKVWPQGSLEEQVQSL 60

Query: 61  VKNWEMEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQKL 119
           VKNWEME FHKVD+ DFRSIDPKK+TFSLNGRKPM+          YIPMLQT +P+K+
Sbjct: 61  VKNWEMEMFHKVDLQDFRSIDPKKYTFSLNGRKPMTLEEMMKLGGGYIPMLQTSIPEKM 119


>Glyma06g12900.1 
          Length = 238

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/119 (67%), Positives = 94/119 (78%)

Query: 1   MASPSVEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTL 60
           MAS SV +DKYR ++  D EKN KWR+GAPPNY+ VNKLF+EGRTK WPPGSLEE+VQTL
Sbjct: 1   MASSSVREDKYRPFMREDSEKNIKWRYGAPPNYDVVNKLFDEGRTKVWPPGSLEEKVQTL 60

Query: 61  VKNWEMEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQKL 119
           VKNWEME FHK D  D RS+DP+K+TFSLNGRKP+S          YIP+LQT +P+KL
Sbjct: 61  VKNWEMEMFHKEDFKDNRSVDPEKYTFSLNGRKPISLEEKRKLGGGYIPLLQTSIPEKL 119


>Glyma13g34420.1 
          Length = 235

 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 78/114 (68%), Gaps = 2/114 (1%)

Query: 6   VEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVKNWE 65
           + KDKYR++LH D+  N +WR G PP Y+AVNKLFEEGRTKEW  GSLEE VQ  +K+WE
Sbjct: 1   MAKDKYRSFLH-DEPDNVQWRHGGPPTYDAVNKLFEEGRTKEWTEGSLEEIVQNAIKSWE 59

Query: 66  MEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQKL 119
           ME  HK  + DF++I+P+KF   +NGR+ +S          Y  +LQ+ LP+ L
Sbjct: 60  MELSHKTRLQDFKTINPEKFKLFVNGREGLS-GEDTLSLGSYNALLQSSLPEDL 112


>Glyma12g35960.1 
          Length = 62

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 8  KDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVKNWEME 67
          KDKYR++LH D+  N +WR G PP YEAVNKLFEE RTKEWP GSLEE VQ  +K+WE+ 
Sbjct: 1  KDKYRSFLH-DEPDNIQWRHGGPPTYEAVNKLFEERRTKEWPEGSLEEIVQNAIKSWEIW 59

Query: 68 FFH 70
           FH
Sbjct: 60 SFH 62


>Glyma06g12890.3 
          Length = 172

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 41/54 (75%)

Query: 66  MEFFHKVDINDFRSIDPKKFTFSLNGRKPMSXXXXXXXXXXYIPMLQTFLPQKL 119
           ME FHKVD+ DFRSIDPKK+TFSLNGRKPM+          YIPMLQT +P+K+
Sbjct: 1   MEMFHKVDLQDFRSIDPKKYTFSLNGRKPMTLEEMMKLGGGYIPMLQTSIPEKM 54