Miyakogusa Predicted Gene

Lj1g3v0900960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0900960.1 tr|Q43486|Q43486_HORVU B32E protein OS=Hordeum
vulgare GN=B32E PE=2 SV=1,36.2,5e-19,GB DEF: SEED PROTEIN B32E
(FRAGMENT),NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL; seg,NULL;
GAT,,CUFF.26521.1
         (261 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g12570.1                                                       334   6e-92
Glyma04g42250.1                                                       333   9e-92
Glyma13g09390.1                                                       236   2e-62
Glyma04g08600.1                                                        57   2e-08
Glyma06g08710.1                                                        53   3e-07
Glyma14g21360.1                                                        51   1e-06
Glyma17g26440.2                                                        50   3e-06
Glyma17g26440.1                                                        50   3e-06
Glyma09g41520.1                                                        49   4e-06

>Glyma06g12570.1 
          Length = 512

 Score =  334 bits (856), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 181/268 (67%), Positives = 194/268 (72%), Gaps = 21/268 (7%)

Query: 1   MLLVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTANSGAREAD---LPLVNVNHEDD 57
           MLLVNNTTDE+LL QGLALNDSLQR L RHDDI KGTA+SGAREA+   LPLVNVNHEDD
Sbjct: 231 MLLVNNTTDEQLLGQGLALNDSLQRVLSRHDDIVKGTADSGAREAETSVLPLVNVNHEDD 290

Query: 58  ESEDDFAQLAPRSSRDTNAQNRKPAYDEAESGRVNSFSPPPPASRKPVYSGTGAVDYLSG 117
           ESEDDFAQLA RSSRDT A NRKPAYD+AE GR+N   PPPPAS+KPVYSGTG VDYLSG
Sbjct: 291 ESEDDFAQLAHRSSRDTQAPNRKPAYDKAEPGRINPLIPPPPASKKPVYSGTGMVDYLSG 350

Query: 118 DAYKAEGSRENSEPTSLAVPLDSSLNP-----------------TASLIFNKQPVYDE-P 159
           D YK EGS ENSEPTS+A PL SS NP                 T+S I + QPVYDE P
Sbjct: 351 DTYKTEGSPENSEPTSIAAPLHSSPNPTSSTIPSLSSSRPHAMSTSSPILSSQPVYDEQP 410

Query: 160 SPMNKSSEHLPPAPWDTXXXXXXXXXXXKHNQRQQFFEQHXXXXXXXXXXXXXXXLVGQT 219
           S ++KSSE LP APWD            K+NQRQQFFEQ                LVGQT
Sbjct: 411 SSVDKSSEGLPAAPWDAQSPGIIPPPPSKYNQRQQFFEQQGASHSSSGSNSSSDSLVGQT 470

Query: 220 QNLSLNSSTPPKQQKPEDALFKDLVDFA 247
           QNLSLNSS+P KQQKPEDALFKDLVDFA
Sbjct: 471 QNLSLNSSSPTKQQKPEDALFKDLVDFA 498


>Glyma04g42250.1 
          Length = 514

 Score =  333 bits (855), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 181/269 (67%), Positives = 193/269 (71%), Gaps = 22/269 (8%)

Query: 1   MLLVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTANSGAREAD---LPLVNVNHEDD 57
           MLLVNNTTDE+LL QGLALNDSLQR L RHDDI KGTA+SGAREA+   LPLVNVNHEDD
Sbjct: 232 MLLVNNTTDEQLLGQGLALNDSLQRVLCRHDDIVKGTADSGAREAETSVLPLVNVNHEDD 291

Query: 58  ESEDDFAQLAPRSSRDTNAQNRKPAYDEAESGRVNSFSPPPPASRKPVYSGTGAVDYLSG 117
           ESEDDFAQLA RSSRDT AQN+KPAYD+AE GR+N   PPPPAS+KPVYSGTG VDYLSG
Sbjct: 292 ESEDDFAQLAHRSSRDTQAQNQKPAYDKAEPGRINPLIPPPPASKKPVYSGTGMVDYLSG 351

Query: 118 DAYKAEGSRENSEPTSLAVPLDSSLNP------------------TASLIFNKQPVYDE- 158
           D YK EGS ENSEPTS   PL SS NP                  T+S IF+ +PVYDE 
Sbjct: 352 DTYKTEGSPENSEPTSFTAPLHSSPNPTSSTIPSLSSSHPHAVSTTSSPIFSSEPVYDEQ 411

Query: 159 PSPMNKSSEHLPPAPWDTXXXXXXXXXXXKHNQRQQFFEQHXXXXXXXXXXXXXXXLVGQ 218
           PS  +KSSE LP APWD            K+NQRQQFFEQ                LVGQ
Sbjct: 412 PSSEDKSSECLPAAPWDAQSPGIIPPPPSKYNQRQQFFEQQGVSHSSSGSSSSYDSLVGQ 471

Query: 219 TQNLSLNSSTPPKQQKPEDALFKDLVDFA 247
           TQNLSLNSSTP KQQKPEDALFKDLVDFA
Sbjct: 472 TQNLSLNSSTPTKQQKPEDALFKDLVDFA 500


>Glyma13g09390.1 
          Length = 508

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/267 (55%), Positives = 173/267 (64%), Gaps = 23/267 (8%)

Query: 1   MLLVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTANSGAREAD---LPLVNVNHEDD 57
           MLLVN T+DE+LL QGLALNDSLQR L +HD+I KGT ++G R  +   LPLV V +E+D
Sbjct: 231 MLLVNETSDEQLLGQGLALNDSLQRVLCQHDNIVKGTPDTGTRGTETSTLPLVYVTNEED 290

Query: 58  ESEDDFAQLAPRSSRDTNAQNRKPAYDEAESGRVNSFSPPPPASRKPVYSGTGAVDYLSG 117
           ES+ DFAQLA RSSRDTNAQ    A  +AE  RVN   PPPPA +KP+++  G +DYLSG
Sbjct: 291 ESDVDFAQLAHRSSRDTNAQR---ANAKAEPVRVNPILPPPPAPKKPIFTDAGMIDYLSG 347

Query: 118 DAYKAEGSRENSEPTSLAVPLDSS-LNPTASL----------------IFNKQPVYDEPS 160
           DAYK E S E SEPTS AVPL SS  NP ++                 I +KQPVYDEP 
Sbjct: 348 DAYKTEASHEQSEPTSYAVPLHSSPTNPASTAATLSSSPPYSPSTPSRILSKQPVYDEPP 407

Query: 161 PMNKSSEHLPPAPWDTXXXXXXXXXXXKHNQRQQFFEQHXXXXXXXXXXXXXXXLVGQTQ 220
           P+NKSSE LP +P +T            +NQRQQFFEQ                L+ QTQ
Sbjct: 408 PINKSSESLPLSPLETQSPGFLLPPPSSYNQRQQFFEQQGVPHSSSGFSSADDSLLAQTQ 467

Query: 221 NLSLNSSTPPKQQKPEDALFKDLVDFA 247
           NLSLNSSTP KQ+K ED LFKDLVDFA
Sbjct: 468 NLSLNSSTPTKQEKTEDVLFKDLVDFA 494


>Glyma04g08600.1 
          Length = 666

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 71/154 (46%), Gaps = 42/154 (27%)

Query: 3   LVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTANSGAREADLP-----LVNVNHEDD 57
           LVN+T+DE LL QGLALND LQR L +H+ IA GT+     E   P     LV+V+    
Sbjct: 236 LVNSTSDESLLCQGLALNDDLQRVLAKHESIASGTSAQNHTEKPKPVPTGALVDVDGPLV 295

Query: 58  ESEDDFAQLAPRSSRDTNAQNRKPAYDEAESGRVNSF---SPP------PPASRKPVYSG 108
           +  D   Q   RSS             EA S  +N     +PP      PPA   P    
Sbjct: 296 DIGDTSKQTDVRSSSSA----------EAGSQTLNQLMLPAPPTSNGSAPPAKVDP---- 341

Query: 109 TGAVDYLSGDAY---KAEGSRENSEPTSLA-VPL 138
              VD LSGD Y   KAE        TSLA VPL
Sbjct: 342 --KVDLLSGDDYNSPKAE--------TSLALVPL 365


>Glyma06g08710.1 
          Length = 666

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 3   LVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTA 38
           LVN+T+DE LL QGLALND LQR L +H+ IA GT+
Sbjct: 236 LVNSTSDESLLCQGLALNDDLQRVLAKHESIASGTS 271


>Glyma14g21360.1 
          Length = 425

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 28/36 (77%)

Query: 3  LVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTA 38
          LVN+T DE LL QGLALND LQR L +H+ I+ GT+
Sbjct: 24 LVNSTLDESLLCQGLALNDDLQRVLAKHESISSGTS 59


>Glyma17g26440.2 
          Length = 598

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 3   LVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTA 38
           LVN+T+DE LL QGLALND LQR L +H+ I+ G +
Sbjct: 162 LVNSTSDESLLCQGLALNDDLQRVLAKHESISSGIS 197


>Glyma17g26440.1 
          Length = 649

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 3   LVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGTA 38
           LVN+T+DE LL QGLALND LQR L +H+ I+ G +
Sbjct: 236 LVNSTSDESLLCQGLALNDDLQRVLAKHESISSGIS 271


>Glyma09g41520.1 
          Length = 506

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 26/37 (70%)

Query: 1   MLLVNNTTDEELLSQGLALNDSLQRELDRHDDIAKGT 37
           M ++  T DEELL QGL LNDS+Q  L RHD IA GT
Sbjct: 242 MQMLTTTGDEELLGQGLELNDSIQSLLARHDSIASGT 278