Miyakogusa Predicted Gene

Lj1g3v0900940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0900940.1 Non Chatacterized Hit- tr|F6HUJ2|F6HUJ2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.31,1e-18,Staygreen,Staygreen protein; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.26503.1
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42260.1                                                       402   e-112
Glyma06g12550.1                                                       399   e-111
Glyma06g12550.2                                                       256   1e-68
Glyma01g42390.1                                                       190   1e-48
Glyma11g02980.1                                                       188   4e-48
Glyma17g14210.1                                                       183   2e-46
Glyma04g09420.1                                                       156   2e-38
Glyma01g05630.1                                                       155   4e-38
Glyma05g03700.1                                                        85   8e-17
Glyma17g14200.1                                                        71   1e-12

>Glyma04g42260.1 
          Length = 254

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/256 (79%), Positives = 215/256 (83%), Gaps = 6/256 (2%)

Query: 1   MACHCA-YXXXXXXXXXXXXXXANPNNMLLKPSA---RCRPFLLSSINNSTPSYNTLVSE 56
           MACHCA Y                 N+++ K S+   RCRPFLLS I N+TPSYNTLVSE
Sbjct: 1   MACHCASYNAFTFSPTREFITTTTTNHIMSKTSSTTTRCRPFLLS-ITNATPSYNTLVSE 59

Query: 57  AVRLLVPPAKFEASKLKVVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVIKLEQL 116
           AVRLLVP A+FEASKLKVVLLEDQ+NK+ASIIPRTYILSHCD TANLTLAVSNVI LEQL
Sbjct: 60  AVRLLVPSARFEASKLKVVLLEDQINKHASIIPRTYILSHCDFTANLTLAVSNVINLEQL 119

Query: 117 RGWYEKDDVVAEWKKVKNEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQYG 176
           RGWYEKDDVVAEWKKV+N+MCLHVHCFVSGPN FLDLAAE RYHIFSKEMPLVLKAI  G
Sbjct: 120 RGWYEKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMPLVLKAIHCG 179

Query: 177 DSVLFHEHPELLDSIVRIYFHSSSKKYNRMECWGPLKDAMEGKQADQIQGLISRDCPPEK 236
           DS LF EHPELLDSIVR+YFHS S+KYNRMECWGPLKDAMEGKQADQ QG I RD  PEK
Sbjct: 180 DSALFREHPELLDSIVRVYFHSCSEKYNRMECWGPLKDAMEGKQADQFQGSIRRD-SPEK 238

Query: 237 CRSPKSIFQALFAFLL 252
            RSPKSIFQALFAFLL
Sbjct: 239 LRSPKSIFQALFAFLL 254


>Glyma06g12550.1 
          Length = 251

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/255 (78%), Positives = 213/255 (83%), Gaps = 7/255 (2%)

Query: 1   MACHCAYXXXXXXXXXXXXXXANPNNMLLKPSA---RCRPFLLSSINNSTPSYNTLVSEA 57
           MACHCA                N  +++ KPS+   RCRPFLLS I N+TPSYNTLVSEA
Sbjct: 1   MACHCASYNAFSFSPTREFFATN--HIMSKPSSTTTRCRPFLLS-ITNATPSYNTLVSEA 57

Query: 58  VRLLVPPAKFEASKLKVVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLR 117
           VRLLVP A+FE SKLKVVLLEDQ+NK+AS  PRTYILSHCD TANLTLAVSNVI LEQLR
Sbjct: 58  VRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNVINLEQLR 117

Query: 118 GWYEKDDVVAEWKKVKNEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQYGD 177
           GWYEKDDVVAEWKKV+N+MCLHVHCFVSGPN FLDLAAE RYHIFSKEMPLVLKAI  GD
Sbjct: 118 GWYEKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMPLVLKAIHCGD 177

Query: 178 SVLFHEHPELLDSIVRIYFHSSSKKYNRMECWGPLKDAMEGKQADQIQGLISRDCPPEKC 237
           S LF EHPELLDSIVR+YFHSSS+KYNRMECWGPLKDAMEGKQADQ QG I RD  PEK 
Sbjct: 178 SALFREHPELLDSIVRVYFHSSSEKYNRMECWGPLKDAMEGKQADQFQGSIRRD-SPEKL 236

Query: 238 RSPKSIFQALFAFLL 252
           RSPKSIFQALFAFLL
Sbjct: 237 RSPKSIFQALFAFLL 251


>Glyma06g12550.2 
          Length = 183

 Score =  256 bits (655), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 131/178 (73%), Positives = 142/178 (79%), Gaps = 6/178 (3%)

Query: 1   MACHCAYXXXXXXXXXXXXXXANPNNMLLKPSA---RCRPFLLSSINNSTPSYNTLVSEA 57
           MACHCA                N  +++ KPS+   RCRPFLLS I N+TPSYNTLVSEA
Sbjct: 1   MACHCASYNAFSFSPTREFFATN--HIMSKPSSTTTRCRPFLLS-ITNATPSYNTLVSEA 57

Query: 58  VRLLVPPAKFEASKLKVVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLR 117
           VRLLVP A+FE SKLKVVLLEDQ+NK+AS  PRTYILSHCD TANLTLAVSNVI LEQLR
Sbjct: 58  VRLLVPSARFEPSKLKVVLLEDQINKHASFTPRTYILSHCDFTANLTLAVSNVINLEQLR 117

Query: 118 GWYEKDDVVAEWKKVKNEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQY 175
           GWYEKDDVVAEWKKV+N+MCLHVHCFVSGPN FLDLAAE RYHIFSKEMPLV   + Y
Sbjct: 118 GWYEKDDVVAEWKKVQNDMCLHVHCFVSGPNSFLDLAAELRYHIFSKEMPLVCLHLTY 175


>Glyma01g42390.1 
          Length = 271

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 144/223 (64%), Gaps = 15/223 (6%)

Query: 31  PSARCRPFLLSSINNSTPSYNTLVSEAVRLLVP------PAKFEASKLKVVLLEDQMNKY 84
           PS   +P L    N+  P Y   V +  + +VP      PA FEASKLKV+ L    NK+
Sbjct: 11  PSKLNKPSLSPRHNSLFPYYGRRVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKH 70

Query: 85  ASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWY---EKDDVVAEWKKVKNEMCLHVH 141
              +PRTY L+H D+TA LTLA+S  I   QL+GWY   ++D+VVA+WKKVK +M LHVH
Sbjct: 71  PGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGKMSLHVH 130

Query: 142 CFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQYGDSVLFHEHPELLDSIVRIYFHSSSK 201
           C +SG +  LD+ A  RY IF KE+P+VLKA+ +GD  LF+ +PEL D++V +YFHS+  
Sbjct: 131 CHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNNYPELQDALVWVYFHSNIP 190

Query: 202 KYNRMECWGPLKDAME----GKQADQIQGLISRD--CPPEKCR 238
           ++N++ECWGPLK+A       K+  + + L+S++    P+ C+
Sbjct: 191 EFNKVECWGPLKEASAPIGGAKEESEQETLLSKEGLAIPQPCQ 233


>Glyma11g02980.1 
          Length = 261

 Score =  188 bits (478), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 140/218 (64%), Gaps = 11/218 (5%)

Query: 31  PSARCRPFLLSSINNSTPSYNTLVSEAVRLLVP------PAKFEASKLKVVLLEDQMNKY 84
           PS   +P L    N+  P     V +  + +VP      PA FEASKLKV+ L    NK+
Sbjct: 11  PSKLNKPSLSPHHNSLFPYCGRRVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKH 70

Query: 85  ASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWY---EKDDVVAEWKKVKNEMCLHVH 141
              +PRTY L+H D+TA LTLA+S  I   QL+GWY   ++D+VVA+WKKVK  M LHVH
Sbjct: 71  PGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRFQRDEVVAQWKKVKGRMSLHVH 130

Query: 142 CFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQYGDSVLFHEHPELLDSIVRIYFHSSSK 201
           C +SG +  LD+ A  RY IF KE+P+VLKA+ +GD  LF+ +PEL D++V +YFHS+  
Sbjct: 131 CHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNSYPELQDALVWVYFHSNIP 190

Query: 202 KYNRMECWGPLKDAMEGKQADQIQGL-ISRDCPPEKCR 238
           ++N++ECWGPLK+A       Q +GL I + C  E+C+
Sbjct: 191 EFNKVECWGPLKEASAPTGGVQEEGLAIPQPC-QEECQ 227


>Glyma17g14210.1 
          Length = 235

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 11/182 (6%)

Query: 52  TLVSEAVRLLVPPAKFEASKLKVVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVI 111
            LV   V  L  PA FEASKLKV+ L     K+ S +PRTY L+HCD+T+ +TL++S  I
Sbjct: 39  VLVGYQVARLFGPAIFEASKLKVLFLGVDQKKHPSYLPRTYTLTHCDITSKITLSISQTI 98

Query: 112 KLEQLRGWYEK---DDVVAEWKKVKNEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPL 168
              QL+GWY K   D+VVA W+K+K +M LHVH  VSG +  LD+ A  RY IF KE+P+
Sbjct: 99  NNSQLQGWYNKLQRDEVVAHWRKIKGKMSLHVHLHVSGGHFLLDICAGIRYFIFCKELPV 158

Query: 169 VLKAIQYGDSVLFHEHPELLDSIVRIYFHSSSKKYNRMECWGPLKDA--------MEGKQ 220
           VL A  +GD  LF ++PEL +++V +YFHS+  K+N++ECWGPLKD          EGKQ
Sbjct: 159 VLNAFIHGDKNLFKDYPELQEALVWVYFHSNISKFNKVECWGPLKDVCAYSSGCHEEGKQ 218

Query: 221 AD 222
            D
Sbjct: 219 GD 220


>Glyma04g09420.1 
          Length = 92

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 83/95 (87%), Gaps = 3/95 (3%)

Query: 74  VVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWYEKDDVVAEWKKVK 133
           VVLLEDQ+NK+ SIIPRTYILSHCD T+NLTL VSN +++    GWYEKDDVVAEWKKV+
Sbjct: 1   VVLLEDQINKHESIIPRTYILSHCDFTSNLTLVVSNFMRI---IGWYEKDDVVAEWKKVQ 57

Query: 134 NEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPL 168
           N+MCL+VHCFVSGPN FLDLA E RY IFSKEMPL
Sbjct: 58  NDMCLYVHCFVSGPNSFLDLAGELRYCIFSKEMPL 92


>Glyma01g05630.1 
          Length = 89

 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 81/95 (85%), Gaps = 6/95 (6%)

Query: 74  VVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWYEKDDVVAEWKKVK 133
           VVLLEDQ+NK+ASIIPRTYIL HCD T+NLTL VSN      LRGW EKDDVVA+WKKV+
Sbjct: 1   VVLLEDQINKHASIIPRTYILFHCDFTSNLTLVVSN------LRGWNEKDDVVAKWKKVQ 54

Query: 134 NEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPL 168
           N+MCLH HCFVS PN FLDLA+E RYHIFSKEMPL
Sbjct: 55  NDMCLHAHCFVSDPNSFLDLASELRYHIFSKEMPL 89


>Glyma05g03700.1 
          Length = 110

 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 41/142 (28%)

Query: 67  FEASKLKVVLLEDQMNKYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWYEK---D 123
           F+ASKLKV+ L     K+ S +PRTY L+HCD+T+ +TL++S  I   QL+GWY K   D
Sbjct: 7   FDASKLKVLFLGVDQKKHPSYLPRTYTLTHCDITSKITLSISQTINKTQLQGWYNKLQRD 66

Query: 124 DVVAEWKKVKNEMCLHVHCFVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQYGDSVLFHE 183
           +VVA W+K+  ++                          +++ P             F +
Sbjct: 67  EVVAHWRKINGKIS-------------------------NRKWP-------------FSD 88

Query: 184 HPELLDSIVRIYFHSSSKKYNR 205
           +PEL +++V +YFH+++ K+N+
Sbjct: 89  YPELHEALVWVYFHANNSKFNK 110


>Glyma17g14200.1 
          Length = 120

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 53/133 (39%)

Query: 83  KYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWYEKDDVVAEWKKVKNEMCLHVHC 142
           K+ + +PRTY L+H D+T+ +TL++S  I   Q                           
Sbjct: 5   KHPADLPRTYTLTHSDITSKITLSISQTINNSQ--------------------------- 37

Query: 143 FVSGPNPFLDLAAEFRYHIFSKEMPLVLKAIQYGDSVLFHEHPELLDSIVRIYFHSSSKK 202
                                     VL A  +GD  LF ++PEL D++V +YFHS+  +
Sbjct: 38  --------------------------VLNAFSHGDKNLFKDYPELHDALVWVYFHSNISE 71

Query: 203 YNRMECWGPLKDA 215
           +N++ECWGPLKDA
Sbjct: 72  FNKVECWGPLKDA 84