Miyakogusa Predicted Gene

Lj1g3v0874370.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0874370.1 CUFF.26458.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42480.2                                                       158   1e-39
Glyma04g42480.1                                                       158   1e-39
Glyma06g12300.1                                                        71   2e-13

>Glyma04g42480.2 
          Length = 125

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 85/125 (68%)

Query: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYTXXXXXXXXXXXXXXXXXXXNFQET 60
           MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYT                   NFQET
Sbjct: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYTILGGFVSSLLFLVLLTFIGNFQET 60

Query: 61  TGTRTGWGXXXXXXXXXXXXXGTVHRVCITTCFLFSAVLLYEVNKLSSSALTPIDSRTKK 120
            G RTGWG              TVHRVCITTCFLFSA LLYEVNK+S SAL+  DSRTKK
Sbjct: 61  IGARTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAALLYEVNKISGSALSTSDSRTKK 120

Query: 121 QGGRA 125
           Q GRA
Sbjct: 121 QSGRA 125


>Glyma04g42480.1 
          Length = 139

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 85/125 (68%)

Query: 1   MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYTXXXXXXXXXXXXXXXXXXXNFQET 60
           MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYT                   NFQET
Sbjct: 15  MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYTILGGFVSSLLFLVLLTFIGNFQET 74

Query: 61  TGTRTGWGXXXXXXXXXXXXXGTVHRVCITTCFLFSAVLLYEVNKLSSSALTPIDSRTKK 120
            G RTGWG              TVHRVCITTCFLFSA LLYEVNK+S SAL+  DSRTKK
Sbjct: 75  IGARTGWGAVIVAEAVALIAASTVHRVCITTCFLFSAALLYEVNKISGSALSTSDSRTKK 134

Query: 121 QGGRA 125
           Q GRA
Sbjct: 135 QSGRA 139


>Glyma06g12300.1 
          Length = 58

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYT 36
          MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYT
Sbjct: 1  MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELYT 36