Miyakogusa Predicted Gene

Lj1g3v0874330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0874330.1 tr|G7KJI9|G7KJI9_MEDTR PHD-finger family protein
expressed OS=Medicago truncatula GN=MTR_6g044600
PE,34.27,1e-18,seg,NULL,CUFF.26504.1
         (414 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g01750.2                                                       141   1e-33
Glyma11g04670.1                                                       132   8e-31
Glyma11g01070.1                                                       111   1e-24
Glyma11g01070.2                                                       108   1e-23
Glyma01g40630.1                                                       102   6e-22
Glyma01g44460.1                                                        89   7e-18
Glyma12g01750.1                                                        74   2e-13
Glyma09g23090.1                                                        70   4e-12
Glyma06g33590.1                                                        69   9e-12
Glyma11g11720.1                                                        69   9e-12
Glyma04g39280.1                                                        60   5e-09
Glyma10g37140.2                                                        58   2e-08
Glyma10g37140.1                                                        58   2e-08
Glyma10g37130.1                                                        52   9e-07

>Glyma12g01750.2 
          Length = 1195

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 146 GPASGEMCPLRDL---AQVEATVLLQGCVVPNTDHSWLGKFLIHNSEGIPRNCDGILAHL 202
           GP SG+     D    A   +++L +  V+P  +  W G F++H +   P    GI AHL
Sbjct: 591 GPTSGKPVVRDDFPNNAMEISSILSKMSVIPEYECIWQGVFVVHRNGMPPDLYTGIQAHL 650

Query: 203 SNCASLGVVEVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVDSYDTYY 262
           S CAS  V EVV                    QF       +NIALYFFA+D++SY+ YY
Sbjct: 651 SACASPKVHEVVKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFARDIESYERYY 710

Query: 263 RGLMNNMINNDLALKGNLDGVELLIFPSNVLPERSQLWNQKMFLWGVFKVQKVNNLANT 321
           +GL+++MI NDLAL+G  DGVELLIF SN L E SQ WN   FLWG+F+ +++N+L +T
Sbjct: 711 KGLLDHMIRNDLALRGTFDGVELLIFASNQLLEDSQRWNMLFFLWGIFRGRRINHLDST 769


>Glyma11g04670.1 
          Length = 130

 Score =  132 bits (332), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 83/124 (66%), Gaps = 2/124 (1%)

Query: 176 DHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXXX-X 234
           D+S  GKF IHNSEGI R  DGI AHLSNCAS+ V+EV +                    
Sbjct: 1   DYSCRGKFQIHNSEGIARTWDGIQAHLSNCASVEVLEVANRLSEIIIILEELPRLRTWPS 60

Query: 235 QFMGSRVTGENIALYFFAKDVDSYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNVLP 294
           QFM S+VT  +IALYFFA D DSY  YY  L+N M+NNDLALKGNLDGVELLIFPSN+LP
Sbjct: 61  QFMRSQVTENDIALYFFAHDSDSY-IYYEQLVNYMMNNDLALKGNLDGVELLIFPSNILP 119

Query: 295 ERSQ 298
             SQ
Sbjct: 120 GYSQ 123


>Glyma11g01070.1 
          Length = 1450

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 29/166 (17%)

Query: 155 LRDL---AQVEATVLLQGCVVPNTDHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVV 211
           +RDL   A   ++V L+    P  +++W G F +H +   P    G+ AHLS+CAS  V+
Sbjct: 776 VRDLSNKALTMSSVPLKMLAFPEYEYTWQGVFEVHRNGKPPDIYTGLQAHLSSCASPKVL 835

Query: 212 EVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVDSYDTYYRGLMNNMIN 271
            VV+                   +F+  +V+   I+          Y+ +Y+GL+++MI 
Sbjct: 836 GVVN-------------------KFL-PKVSLSEISRLSI------YERHYKGLLDHMIR 869

Query: 272 NDLALKGNLDGVELLIFPSNVLPERSQLWNQKMFLWGVFKVQKVNN 317
           NDLALKG+ DGVELLIFPSN LPE SQ WN   FLWGVF+ +++N+
Sbjct: 870 NDLALKGDFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRRINH 915


>Glyma11g01070.2 
          Length = 1450

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 11/153 (7%)

Query: 173 PNTDHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXX 232
           P  +++W G F +H +   P    G+ AHLS+CAS  V+ VV+                 
Sbjct: 766 PEYEYTWQGVFEVHRNGKPPDIYTGLQAHLSSCASPKVLGVVNKFLPKVSLSEISRLSMW 825

Query: 233 XXQFMGSRVTGENIALYFFAKDVDS--------YDTYYRGLMNNMINNDLALKGNLDGVE 284
             QF      G+   +     D +         Y+ +Y+GL+++MI NDLALKG+ DGVE
Sbjct: 826 PSQFHHG---GQMDIILILTVDHEMQKIHFSLFYERHYKGLLDHMIRNDLALKGDFDGVE 882

Query: 285 LLIFPSNVLPERSQLWNQKMFLWGVFKVQKVNN 317
           LLIFPSN LPE SQ WN   FLWGVF+ +++N+
Sbjct: 883 LLIFPSNQLPENSQRWNMLFFLWGVFRGRRINH 915


>Glyma01g40630.1 
          Length = 229

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 102/220 (46%), Gaps = 47/220 (21%)

Query: 181 GKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXXX--XQFMG 238
           GKF IHN EGI R  D I AHLSN AS  V+EV +                     QFM 
Sbjct: 1   GKFQIHNIEGIARTWDAIQAHLSNRASAEVLEVANTNRLSEIIILEELPRLRTWPSQFMR 60

Query: 239 SRVTGENIALYFFAKDVDSYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNVLPERSQ 298
           S+VT +NIA YFFA D DSY  YY  L+N M+NNDLALKG+LDG  +  F   V  E  +
Sbjct: 61  SQVTEDNIAQYFFAHDSDSY-IYYEQLVNYMMNNDLALKGHLDGDGMACFSFGVYSEDKR 119

Query: 299 LWNQKMFLWGVFKVQKVNNLANTPVSNSLKQGNRDTV----------------------- 335
              Q++                 PVSNSLK  N D +                       
Sbjct: 120 RITQQVH----------------PVSNSLKLKNGDDMAIVDEIPEFESSGDTVLAVGENS 163

Query: 336 -KRGAIDLNAYTEDANVDRGLNLTVQGRSTTPENGSVRIE 374
             +G +   A  E A VD   N+++  +S T ENGSV IE
Sbjct: 164 DSKGGV---ANAEHAVVDIN-NVSLWPKSETQENGSVGIE 199


>Glyma01g44460.1 
          Length = 1418

 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 26/148 (17%)

Query: 155 LRDLAQVEATVLLQGCVVPNTDHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVV 214
           L D A   ++V L+    P  +++W G F +H +   P    G  AHLS+CAS  V+ VV
Sbjct: 782 LSDKAVTMSSVPLKMLAFPEYEYTWQGVFEVHRNGKPPDLYTGFQAHLSSCASPKVLGVV 841

Query: 215 DXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVDSYDTYYRGLMNNMINNDL 274
           +                   +F+      E   L         Y+ +Y+GL+++MI NDL
Sbjct: 842 N-------------------KFLPKVSLSEVSRLSI-------YERHYKGLLDHMIRNDL 875

Query: 275 ALKGNLDGVELLIFPSNVLPERSQLWNQ 302
           ALKGN DGV+LLIFPSN LPE SQL  +
Sbjct: 876 ALKGNFDGVQLLIFPSNQLPENSQLEEK 903


>Glyma12g01750.1 
          Length = 1381

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 20/196 (10%)

Query: 146 GPASGEMCPLRDL---AQVEATVLLQGCVVPNTDHSWLGKFLIHNSEGIPRNCDGILAHL 202
           GP SG+     D    A   +++L +  V+P  +  W G F++H +   P    GI AHL
Sbjct: 797 GPTSGKPVVRDDFPNNAMEISSILSKMSVIPEYECIWQGVFVVHRNGMPPDLYTGIQAHL 856

Query: 203 SNCASLGVVEVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVDSYDTYY 262
           S CAS  V EVV                    QF       +NIALYFFA+D++  +  Y
Sbjct: 857 SACASPKVHEVVKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFARDIERQEYEY 916

Query: 263 RGLMNNMINNDLALKGNLDGVELLI-----FPSNVLP-------ERSQL-----WNQKMF 305
              +  +  +      +     LL+     +P N LP         +Q      WN   F
Sbjct: 917 HSSIETICGDFSVFIPDAGCWHLLVDSVMLWPVNFLPFGHWWSVLAAQFGLLDSWNMLFF 976

Query: 306 LWGVFKVQKVNNLANT 321
           LWG+F+ +++N+L +T
Sbjct: 977 LWGIFRGRRINHLDST 992


>Glyma09g23090.1 
          Length = 302

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 197 GILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVD 256
           G+LAH+S  AS  V+E                       FM      ++IALYFF  D +
Sbjct: 183 GLLAHVSTLASPKVLEETRFFPDVLCPDLRPRTAVWPKSFMKCGPNMDSIALYFFP-DSE 241

Query: 257 SYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNVLPERSQLWNQKMFLWGVFKVQK 314
             +  +  L+ +M+  DL+L+  ++  ELLIFPS +LP + + + +K +LWGVF+ +K
Sbjct: 242 RVERAFHKLVEDMMYFDLSLRTEVENAELLIFPSILLPIQCRRFQEKYYLWGVFRAKK 299


>Glyma06g33590.1 
          Length = 302

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 197 GILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVD 256
           G+LAH+S  AS  V+E                       FM      ++IALYFF  D +
Sbjct: 183 GLLAHVSTLASPKVLEETRFFPDVLCPDLRPRTAVWPKSFMKCGPNMDSIALYFFP-DSE 241

Query: 257 SYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNVLPERSQLWNQKMFLWGVFKVQK 314
             +  +  L+ +M+  DL+L+  ++  ELLIFPS +LP + + + +K +LWGVF+ +K
Sbjct: 242 RVERAFHKLVEDMMYFDLSLRTEVENAELLIFPSILLPIQCRRFLEKYYLWGVFRAKK 299


>Glyma11g11720.1 
          Length = 1445

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 89/213 (41%), Gaps = 38/213 (17%)

Query: 146  GPASGEMCPLRDL---AQVEATVLLQGCVVPNTDHSWLGKFLIHNSEGIPRNCDGILAHL 202
            GP SG+   +RDL   A   +++L +  V+P  ++ W G F +H +   P    GI AHL
Sbjct: 797  GPTSGKPV-VRDLPNNAMEISSILSKMSVIPEYEYIWQGVFKVHRNGMPPDLYTGIQAHL 855

Query: 203  SNCASLGVVEVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDVDSYDTYY 262
            S CAS  V EVV                    QF       +NIALYFFAKD++     Y
Sbjct: 856  SACASPKVHEVVKKFLPEVSLNEVSRLSIWPSQFHQGGAKEDNIALYFFAKDIERQGYEY 915

Query: 263  RGLMNN------MINNDLALK-----------GNLDGVELL---------IFPSNVLPER 296
               ++       M+ N L L            G +   ELL          F  N +   
Sbjct: 916  HSFIDKHLGGLLMVLNFLYLHLISFQKIHNTMGIVSYKELLTVVLYCILDFFVINDIAIW 975

Query: 297  SQL--------WNQKMFLWGVFKVQKVNNLANT 321
              L        WN   FLWG+F+ +++N+L +T
Sbjct: 976  GDLGVFIPGAGWNMLFFLWGIFRGRRINHLDST 1008


>Glyma04g39280.1 
          Length = 265

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 173 PNTDHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXX 232
           P +D  W G+F+++ +        G++A+ S+ A   V+  V                  
Sbjct: 122 PLSDPVWTGQFILNKATDF-----GLVAYASSKACSKVLSAVTVLPTLLDVEILSRFAIW 176

Query: 233 XXQFMGSRVTGENIALYFFA---KDVDSYDTYYRGLMNNMINNDLALKGNLDGVELLIFP 289
              F       +NI LYFF    +D  S+D     ++N++I  + ALK  ++ VELLIF 
Sbjct: 177 PKSFDMFPPNSDNIGLYFFPLYERDELSFDR----VLNDIIEQEFALKAVINNVELLIFS 232

Query: 290 SNVLPERSQLWNQKMFLWGVFK 311
           S++LP   +   +K +LWG FK
Sbjct: 233 SHLLPPNDRRICEKYYLWGAFK 254


>Glyma10g37140.2 
          Length = 309

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 173 PNTDHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXX 232
           P  D  W G     N  G  R   G+LAH+SN A   V E                    
Sbjct: 165 PTIDPIWRGSMYFCN--GTIRTVSGLLAHISNLACSQVAEETGHFPEVLHAEFLPRDKVW 222

Query: 233 XXQFMGSRVTGENIALYFFAKDVDSYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNV 292
              F     T ++IAL+FF  D +  +  +  L+ +++     ++      ELLIFPS  
Sbjct: 223 AESFKRGDPTDQDIALFFFP-DSEGSEKDFDVLVEDIMICKHVIRFVGKNAELLIFPSTE 281

Query: 293 LPERSQLWNQKMFLWGVFK 311
           LP ++  +  K +LWGVF+
Sbjct: 282 LPVQNWRYEAKYYLWGVFR 300


>Glyma10g37140.1 
          Length = 338

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 173 PNTDHSWLGKFLIHNSEGIPRNCDGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXX 232
           P  D  W G     N  G  R   G+LAH+SN A   V E                    
Sbjct: 194 PTIDPIWRGSMYFCN--GTIRTVSGLLAHISNLACSQVAEETGHFPEVLHAEFLPRDKVW 251

Query: 233 XXQFMGSRVTGENIALYFFAKDVDSYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNV 292
              F     T ++IAL+FF  D +  +  +  L+ +++     ++      ELLIFPS  
Sbjct: 252 AESFKRGDPTDQDIALFFFP-DSEGSEKDFDVLVEDIMICKHVIRFVGKNAELLIFPSTE 310

Query: 293 LPERSQLWNQKMFLWGVFK 311
           LP ++  +  K +LWGVF+
Sbjct: 311 LPVQNWRYEAKYYLWGVFR 329


>Glyma10g37130.1 
          Length = 374

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 1/128 (0%)

Query: 196 DGILAHLSNCASLGVVEVVDXXXXXXXXXXXXXXXXXXXQFMGSRVTGENIALYFFAKDV 255
           +G+LAH+SN A   V E                       F   R T ++IAL+ F  D 
Sbjct: 245 NGVLAHMSNLACSKVAEETGHFPEVLHAELLPRDKVWPESFKSRRPTDQDIALFIFP-DT 303

Query: 256 DSYDTYYRGLMNNMINNDLALKGNLDGVELLIFPSNVLPERSQLWNQKMFLWGVFKVQKV 315
           +  +  +  L+ +++ N+  ++      ELLIF S  LP +   +  K +LWGVF+ ++ 
Sbjct: 304 EGSEKDFDKLVEDIMINEHVIRIVAKKAELLIFHSIELPIQYWRFEAKYYLWGVFRRKQT 363

Query: 316 NNLANTPV 323
           +   N  V
Sbjct: 364 SEETNDAV 371