Miyakogusa Predicted Gene

Lj1g3v0862940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0862940.1 Non Chatacterized Hit- tr|D8TS12|D8TS12_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,35.43,1e-18,DUF2372,Proteasome assembly chaperone 3,CUFF.26465.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42580.1                                                       209   4e-55
Glyma04g42580.2                                                       199   8e-52
Glyma06g12180.1                                                       130   3e-31

>Glyma04g42580.1 
          Length = 126

 Score =  209 bits (533), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 96/125 (76%), Positives = 113/125 (90%)

Query: 5   NVSSSAMKFPVSQLNFSLEIKGNKTEIFLSNYEDHFLVVATQIGSMGTILHARKEEGMSI 64
           N  SS  +FPVSQLNFS +IKGN+TEI +S YEDHF+V+ATQIG+MGTI++ARKEEG+SI
Sbjct: 2   NTESSTSQFPVSQLNFSRQIKGNETEIIISRYEDHFMVIATQIGTMGTIMYARKEEGVSI 61

Query: 65  NPTFSVSVLFGKRDEPMLVACARQLIEHMTLSGFSKPLVLSLGLKDHSPETLKGIIAAVI 124
           NPTF+VSV+FGKRDEPMLVACARQLIEHM+LSG S+PLVLSLGLKDHS ETLKGI++AV+
Sbjct: 62  NPTFNVSVIFGKRDEPMLVACARQLIEHMSLSGSSRPLVLSLGLKDHSVETLKGIVSAVM 121

Query: 125 DKRQW 129
           D   W
Sbjct: 122 DNSMW 126


>Glyma04g42580.2 
          Length = 123

 Score =  199 bits (505), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 110/125 (88%), Gaps = 3/125 (2%)

Query: 5   NVSSSAMKFPVSQLNFSLEIKGNKTEIFLSNYEDHFLVVATQIGSMGTILHARKEEGMSI 64
           N  SS  +FPVSQLNFS +IKGN+TEI +S YEDHF+V+ATQIG+MGTI+   KEEG+SI
Sbjct: 2   NTESSTSQFPVSQLNFSRQIKGNETEIIISRYEDHFMVIATQIGTMGTII---KEEGVSI 58

Query: 65  NPTFSVSVLFGKRDEPMLVACARQLIEHMTLSGFSKPLVLSLGLKDHSPETLKGIIAAVI 124
           NPTF+VSV+FGKRDEPMLVACARQLIEHM+LSG S+PLVLSLGLKDHS ETLKGI++AV+
Sbjct: 59  NPTFNVSVIFGKRDEPMLVACARQLIEHMSLSGSSRPLVLSLGLKDHSVETLKGIVSAVM 118

Query: 125 DKRQW 129
           D   W
Sbjct: 119 DNSMW 123


>Glyma06g12180.1 
          Length = 84

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 70/71 (98%)

Query: 42  VVATQIGSMGTILHARKEEGMSINPTFSVSVLFGKRDEPMLVACARQLIEHMTLSGFSKP 101
           V+ATQIG++GTI++ARKEEG+SINPTF+VSV+FGKRDEPMLVACARQ+IEHM+LSG S+P
Sbjct: 1   VIATQIGTLGTIMYARKEEGVSINPTFNVSVIFGKRDEPMLVACARQMIEHMSLSGSSRP 60

Query: 102 LVLSLGLKDHS 112
           LVLSLGLKDHS
Sbjct: 61  LVLSLGLKDHS 71