Miyakogusa Predicted Gene

Lj1g3v0861750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0861750.1 tr|B1XIK5|B1XIK5_SYNP2 Iojap-related protein
OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR,44.76,2e-18,iojap_ybeB: iojap-like ribosome-associated
protein,Ribosome-associated, Iojap-like; SUBFAMILY NOT
NA,NODE_39953_length_1084_cov_115.934502.path1.1
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g40740.1                                                       406   e-114
Glyma08g18330.1                                                       403   e-113
Glyma15g40740.2                                                       266   2e-71
Glyma18g01270.1                                                        53   3e-07
Glyma18g01270.2                                                        52   4e-07
Glyma11g37310.1                                                        51   9e-07

>Glyma15g40740.1 
          Length = 240

 Score =  406 bits (1044), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 217/242 (89%), Gaps = 3/242 (1%)

Query: 1   MPPSTTLLSLAGASASVPASFPGELGHLETKCSPKPRKLFTCSCIKGLPLSKHNINGFNL 60
           M PS+T+LSLAG  A VP SF G+LGHLETK SP+PRK+F+ SCIKGLPL ++ +NG   
Sbjct: 1   MLPSSTVLSLAGTGAGVPVSFSGKLGHLETKFSPRPRKVFSRSCIKGLPLQQNTVNGLKS 60

Query: 61  KXXXXXNSLLSFALGKEADDRFLSDVSKDTDDMYDELLNNYGKVVYTRKDRKPASAEVDD 120
           K     N+  SFALGK A+D FLSDV+ DTD+MYDEL+NNYGKVV++RKD+KPASAE+DD
Sbjct: 61  KKR---NTHSSFALGKNAEDSFLSDVNGDTDEMYDELINNYGKVVFSRKDKKPASAEIDD 117

Query: 121 DAESLSFAVELATIASEVKAGDIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRDRA 180
           DAESLSFAVELAT+ASEVKAGDI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+RDRA
Sbjct: 118 DAESLSFAVELATVASEVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDRA 177

Query: 181 EKKYGKIPTGDARPNSWTLLDFGDVVVHIFLPPQRAFYNLEEFYGNATPVELPFENQPPP 240
           EKKYGKIPTGD +PNSWTLLDFGDVVVHIFLP QRAFYNLEEFYGNATPVELPFENQPPP
Sbjct: 178 EKKYGKIPTGDTKPNSWTLLDFGDVVVHIFLPSQRAFYNLEEFYGNATPVELPFENQPPP 237

Query: 241 FR 242
           FR
Sbjct: 238 FR 239


>Glyma08g18330.1 
          Length = 270

 Score =  403 bits (1036), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/242 (80%), Positives = 216/242 (89%), Gaps = 3/242 (1%)

Query: 1   MPPSTTLLSLAGASASVPASFPGELGHLETKCSPKPRKLFTCSCIKGLPLSKHNINGFNL 60
           M PS+T+LSLAG  A VP SF GELGHLETK S +PRK+F+ SCIKG+PL ++ ING N 
Sbjct: 31  MLPSSTVLSLAGTRAGVPVSFSGELGHLETKFSSRPRKVFSRSCIKGIPLQQNTINGLNS 90

Query: 61  KXXXXXNSLLSFALGKEADDRFLSDVSKDTDDMYDELLNNYGKVVYTRKDRKPASAEVDD 120
           K     NSL SFA GK+A+D F SDV+ DTD+MYDEL+NNYGKVV++RKD+KPASAE+DD
Sbjct: 91  KNR---NSLSSFAFGKKAEDSFFSDVNGDTDEMYDELINNYGKVVFSRKDKKPASAEIDD 147

Query: 121 DAESLSFAVELATIASEVKAGDIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRDRA 180
           DAESLSFAVELAT+ASEVKAGDI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+RDRA
Sbjct: 148 DAESLSFAVELATVASEVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDRA 207

Query: 181 EKKYGKIPTGDARPNSWTLLDFGDVVVHIFLPPQRAFYNLEEFYGNATPVELPFENQPPP 240
           EKKYGKIPTGD +PNSWTLLDFGDVVVHIFLP QRAFYNLEEFYGNAT VELPFENQPPP
Sbjct: 208 EKKYGKIPTGDTKPNSWTLLDFGDVVVHIFLPSQRAFYNLEEFYGNATQVELPFENQPPP 267

Query: 241 FR 242
           +R
Sbjct: 268 YR 269


>Glyma15g40740.2 
          Length = 175

 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 130/173 (75%), Positives = 150/173 (86%), Gaps = 3/173 (1%)

Query: 1   MPPSTTLLSLAGASASVPASFPGELGHLETKCSPKPRKLFTCSCIKGLPLSKHNINGFNL 60
           M PS+T+LSLAG  A VP SF G+LGHLETK SP+PRK+F+ SCIKGLPL ++ +NG   
Sbjct: 1   MLPSSTVLSLAGTGAGVPVSFSGKLGHLETKFSPRPRKVFSRSCIKGLPLQQNTVNGLKS 60

Query: 61  KXXXXXNSLLSFALGKEADDRFLSDVSKDTDDMYDELLNNYGKVVYTRKDRKPASAEVDD 120
           K     N+  SFALGK A+D FLSDV+ DTD+MYDEL+NNYGKVV++RKD+KPASAE+DD
Sbjct: 61  KKR---NTHSSFALGKNAEDSFLSDVNGDTDEMYDELINNYGKVVFSRKDKKPASAEIDD 117

Query: 121 DAESLSFAVELATIASEVKAGDIRVLFVKPLVYWTRFFIIATAFSRPQIDAIG 173
           DAESLSFAVELAT+ASEVKAGDI+VLFVKPLVYWTRFFIIATAFSRPQIDAIG
Sbjct: 118 DAESLSFAVELATVASEVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIG 170


>Glyma18g01270.1 
          Length = 177

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 118 VDDDAESLSFAVELATIASEVKAGDIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMR 177
           +D     L    E+ T+ ++VKA D++V+ V     W  F ++AT  S   +  I   + 
Sbjct: 31  IDGRKHHLLNLQEIETVLTDVKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALI 90

Query: 178 DRAEKKYGKI-----PTGDARPNS-WTLLDFGDVVVHIFLPPQRAFYNLEEFY 224
            +A++K   +     P+ + +    W ++D G V+VH      RA+YNLE  +
Sbjct: 91  YKAKQKQRGVERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLW 143


>Glyma18g01270.2 
          Length = 157

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 130 ELATIASEVKAGDIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRDRAEKKYGKI-- 187
           E+ T+ ++VKA D++V+ V     W  F ++AT  S   +  I   +  +A++K   +  
Sbjct: 23  EIETVLTDVKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQRGVER 82

Query: 188 ---PTGDARPNS-WTLLDFGDVVVHIFLPPQRAFYNLEEFY 224
              P+ + +    W ++D G V+VH      RA+YNLE  +
Sbjct: 83  MMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLW 123


>Glyma11g37310.1 
          Length = 177

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 118 VDDDAESLSFAVELATIASEVKAGDIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMR 177
           VD     L    E+ T+ ++VKA +++V+ V     W  F ++AT  S   +  I   + 
Sbjct: 31  VDGRKHHLLDLQEIETVLTDVKADNVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALI 90

Query: 178 DRAEKKYGKI-----PTGDARPNS-WTLLDFGDVVVHIFLPPQRAFYNLEEFY 224
            +A++K   +     P+ + +    W ++D G V+VH      RA+YNLE  +
Sbjct: 91  YKAKQKQRGVERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLW 143