Miyakogusa Predicted Gene

Lj1g3v0815000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0815000.1 tr|G7ZYM9|G7ZYM9_MEDTR FBD-associated F-box
protein OS=Medicago truncatula GN=MTR_076s0012 PE=4 SV=1,32.8,6e-19,no
description,NULL; LRR_2,Leucine-rich repeat 2,CUFF.26368.1
         (198 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46590.1                                                       117   7e-27
Glyma08g46590.2                                                       117   1e-26
Glyma08g46320.1                                                       110   1e-24
Glyma13g43040.1                                                        89   2e-18
Glyma18g35330.1                                                        89   3e-18
Glyma18g35320.1                                                        79   4e-15
Glyma18g35360.1                                                        65   3e-11
Glyma18g35370.1                                                        52   6e-07

>Glyma08g46590.1 
          Length = 515

 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 100/190 (52%), Gaps = 20/190 (10%)

Query: 9   DVHLPSLKVLHLQDLIFLERESLAKLLSGSPNLQDFKARGLRFDNYNTDREFKTLPKLLR 68
            V LP L  LHLQ  I LER  +A+LL GSPNL+      + F     +  F+ LPKLLR
Sbjct: 333 SVDLPLLTTLHLQSFI-LERRDMAELLRGSPNLEYLFVGHMYFSG--PEARFERLPKLLR 389

Query: 69  ADISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWID-LDYSYIFPMFHNLTHVELVY 127
           A I+         EVVNNVQFL +D           W++  + + + P F NLTH+EL Y
Sbjct: 390 ATIAFGHVPL---EVVNNVQFLRID-----------WMEHKEEANLIPEFQNLTHLELGY 435

Query: 128 QPYNSDWSQVVEFLHHCPKLQVLLINQPNFHSFDSEQIGKIGDWQFPSTIPECILLHLRR 187
                DW  V+E +  CP LQ+L I+  +      +  G   DW FP ++P  I LHL+ 
Sbjct: 436 SECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDEG--ADWPFPRSVPSSISLHLKT 493

Query: 188 CYLNDYRGTK 197
           C++  Y G+K
Sbjct: 494 CFIRCYGGSK 503


>Glyma08g46590.2 
          Length = 380

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 103/197 (52%), Gaps = 23/197 (11%)

Query: 5   PFSSD---VHLPSLKVLHLQDLIFLERESLAKLLSGSPNLQDFKARGLRFDNYNTDREFK 61
           PF  D   V LP L  LHLQ  I LER  +A+LL GSPNL+      + F     +  F+
Sbjct: 148 PFPLDFKSVDLPLLTTLHLQSFI-LERRDMAELLRGSPNLEYLFVGHMYFSG--PEARFE 204

Query: 62  TLPKLLRADISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWID-LDYSYIFPMFHNL 120
            LPKLLRA I+         EVVNNVQFL +D           W++  + + + P F NL
Sbjct: 205 RLPKLLRATIAFGHVPL---EVVNNVQFLRID-----------WMEHKEEANLIPEFQNL 250

Query: 121 THVELVYQPYNSDWSQVVEFLHHCPKLQVLLINQPNFHSFDSEQIGKIGDWQFPSTIPEC 180
           TH+EL Y     DW  V+E +  CP LQ+L I+  +      +  G   DW FP ++P  
Sbjct: 251 THLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDEG--ADWPFPRSVPSS 308

Query: 181 ILLHLRRCYLNDYRGTK 197
           I LHL+ C++  Y G+K
Sbjct: 309 ISLHLKTCFIRCYGGSK 325


>Glyma08g46320.1 
          Length = 379

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 21/188 (11%)

Query: 10  VHLPSLKVLHLQDLIFLERESLAKLLSGSPNLQDFKARGLRFDNYNTDREFKTLPKLLRA 69
           VHLP+LK LHL +   LE   LAK+L   P L+D +A  + F N +   EF+ +PKL++A
Sbjct: 153 VHLPALKTLHLDNFTMLETWHLAKVLHECPILEDLRANNMFFYNKSDVVEFQIMPKLVKA 212

Query: 70  DISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWIDLDYSYIFPMFHNLTHVELVYQP 129
           +I       +  +V +NV++L       R  ++P       +  FP+FHNL H+E+ +  
Sbjct: 213 EIKVNFRFEIPLKVASNVEYL-------RFFIKPD------TECFPVFHNLIHLEVSFW- 258

Query: 130 YNSDWSQVVEFLHHCPKLQVLLINQPNFHSFDSEQIGKIGDWQFPSTIPECILLHLRRCY 189
           +   W+ V E + HCPKLQ  ++  P   SF          W FP  +PECI   LRRC 
Sbjct: 259 FVVRWNLVFEMIKHCPKLQTFVLFLP-LESFPP------MVWTFPQIVPECISSKLRRCT 311

Query: 190 LNDYRGTK 197
           + +Y+G K
Sbjct: 312 IMNYKGKK 319


>Glyma13g43040.1 
          Length = 248

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 15/148 (10%)

Query: 8   SDVHLPSLKVLHLQDLIFLERESL-AKLLSGSPNLQDFKARGLRFDNYNTDREFKTLPKL 66
           S   LP LK+LHL  + F +  +   +LLSG PNL+D + + L   +   + +FK LPKL
Sbjct: 77  SSADLPLLKILHLPHVFFSQNINFFGELLSGCPNLEDMELKYLGSTSNAIEAKFKKLPKL 136

Query: 67  LRADISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWIDLDYSYIFPMFHNLTHVELV 126
           +RA ++  Q   +  EVV+NVQFL ++           W       + P FHNLT +E  
Sbjct: 137 VRAVMNKDQ---IPLEVVHNVQFLRIN-----------WRVKINEDLIPEFHNLTRIEFS 182

Query: 127 YQPYNSDWSQVVEFLHHCPKLQVLLINQ 154
           Y  +N +W +V++ L HCP LQ L+I+Q
Sbjct: 183 YSEHNRNWMEVLKVLKHCPNLQHLVIDQ 210


>Glyma18g35330.1 
          Length = 342

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 19/189 (10%)

Query: 8   SDVHLPSLKVLHLQDLIFLERESLAKLLSGSPNLQDFKARGLRF-DNYNTDREFKTLPKL 66
           S V LPSLK LHL+ + F+E   L ++LS  P L+D   R L   +N+++D   + +PKL
Sbjct: 122 SSVDLPSLKTLHLRKVHFVEPRLLLQILSACPLLEDLLIRSLHVTNNFSSDEHLERMPKL 181

Query: 67  LRADISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWIDLDYSYIFPMFHNLTHVELV 126
           ++ADIS   +  +      NV+FL   ++ S    + +            F NLTH+EL+
Sbjct: 182 VKADIS-NASIDVQMATFYNVEFLR-TQVGSDFFSDNK----------HTFLNLTHMELI 229

Query: 127 YQPYNSDWSQVVEFLHHCPKLQVLLINQPNFHSFDSEQIGKIGDWQFPSTIPECILLHLR 186
           ++   +   +++  LH CP LQ+L++++ N        +    D  +P  +P+C+   L+
Sbjct: 230 FRFRFNVLGRLINLLHECPNLQILVVDEGNLF------VKTSSDVSYPQFVPKCLSTQLK 283

Query: 187 RCYLNDYRG 195
           RC +  Y G
Sbjct: 284 RCCVKKYGG 292


>Glyma18g35320.1 
          Length = 345

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 46/191 (24%)

Query: 7   SSDVHLPSLKVLHLQDLIFLERESLAKLLSGSPNLQDFKARGLRFDNYNTDREFKTLPKL 66
           S  V+LP LK+LHL  + F +   LA+LLSGSPNL+D +A+                P  
Sbjct: 147 SCCVYLPRLKILHLSSVAFSKDRDLAQLLSGSPNLEDLEAK---------------FP-- 189

Query: 67  LRADISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWIDLDYSYIFPMFHNLTHVELV 126
                          EVV+NVQFL ++ +   L++  ++   D++     F NLTH+E  
Sbjct: 190 --------------LEVVDNVQFLRINWV---LIISVRFFK-DHNGFTSEFQNLTHLE-- 229

Query: 127 YQPYNSDWSQVVEFLHHCPKLQVLLINQPNFHSFDSEQIGKIGDWQFPSTIPECILLHLR 186
           +  Y   +  V++ +  CPKLQ+L I     +  DS    + GD  +P ++P CI  HL+
Sbjct: 230 FFSYRGGFF-VLDLIKRCPKLQILTI-----YKVDSALFAE-GD--YPQSVPICISFHLK 280

Query: 187 RCYLNDYRGTK 197
            C L  Y G+K
Sbjct: 281 ICTLKRYNGSK 291


>Glyma18g35360.1 
          Length = 357

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 34/188 (18%)

Query: 8   SDVHLPSLKVLHLQDLIFLERESLAKLLSGSPNLQDFKARGLRFDNYNTDREFKTLPKLL 67
           S    PSLK LHL+ +   E   L ++L+  P L+D     LR  +         LP L 
Sbjct: 119 SSCDFPSLKTLHLKMVHLRECRCLVEILAACPVLEDLFISSLRVTSSYCHGACIQLPTL- 177

Query: 68  RADISATQTCFLFTEVVNNVQFLHLDKIPSRLLLEPQWIDLDYSYIFPMFHNLTHVELVY 127
                            +NV+FL  D +  R           +  +F  F NLT++EL+ 
Sbjct: 178 -----------------SNVKFLRTDVVQLRT---------TFVGLFT-FVNLTYLELIV 210

Query: 128 QPYNSDWSQVVEFLHHCPKLQVLLINQPNFHSFDSEQIGKIGDWQFPSTIPECILLHLRR 187
             +  DW  +++ LH CP LQ+L+I++ N  SF+  +     +W +   +P+C+   L+ 
Sbjct: 211 DAHYWDW--LLKLLHCCPNLQILVIDKGN--SFN--KTSNDENWVYSHLVPKCLSSKLKT 264

Query: 188 CYLNDYRG 195
           C    Y G
Sbjct: 265 CRFQKYEG 272


>Glyma18g35370.1 
          Length = 409

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 29/203 (14%)

Query: 7   SSDVHLPSLKVLHLQD-LIFLERESLAKLLSGSPNLQDF--------KARGLRFDNYNTD 57
           S  V LP LKVLH+ D ++F   + + KLL+G P L+D            G+     N  
Sbjct: 166 SFSVSLPLLKVLHVGDRVLFGCHDYVVKLLAGCPALEDLVLESTYNDACGGVVCAEGNFQ 225

Query: 58  REFKTLPKLLRADISATQTC----FLFTEVVNNVQFLHLDKIPSRLLLEPQWIDLDYSYI 113
            + K L    +   S  + C     L    ++NV+ L L       L      D+     
Sbjct: 226 LDLKHLSS-AKIGFSWKERCLKSMLLIFRALSNVRCLSLSTSTVACLKHASTSDI----- 279

Query: 114 FPMFHNLTHVELVYQPYNSDWSQVVEFLHHCPKLQVLLI-NQPNFHSFDSEQIGKIGDWQ 172
            P+F  L  +E+ +  Y+  W  +   L    KL+VL I  +P  ++      G+   W 
Sbjct: 280 -PVFDKLIQLEISFGNYS--WDLLASLLQRSHKLEVLTIYKEPQKYA-----KGQEPRWI 331

Query: 173 FPSTIPECILLHLRRCYLNDYRG 195
            P  +PEC LLHL+   L +Y+G
Sbjct: 332 HPLLVPEC-LLHLKTFCLREYQG 353