Miyakogusa Predicted Gene

Lj1g3v0812930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0812930.1 tr|D7FH97|D7FH97_ECTSI Similar to chromosome
fragility associated gene 1 OS=Ectocarpus siliculosus
G,34.62,2e-18,CHROMOSOME TRANSMISSION FIDELITY FACTOR 18,NULL;
AAA,ATPase, AAA-type, core; P-loop containing nucle,CUFF.26363.1
         (619 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11830.1                                                       588   e-168
Glyma04g42920.1                                                       546   e-155
Glyma14g23550.1                                                       321   2e-87
Glyma13g03190.1                                                        89   2e-17

>Glyma06g11830.1 
          Length = 1190

 Score =  588 bits (1516), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 347/619 (56%), Positives = 395/619 (63%), Gaps = 97/619 (15%)

Query: 53  MAGPVVELTPSGNAGTPARRSVRRRLVQTTLFPLNPPPEPRDKPIXXXXXXXXXXXXYCG 112
           M   V +L+PS NA  P RR VRRRLVQTTLFP  PP     +P+            Y  
Sbjct: 1   MDATVTQLSPSCNAAEPPRRIVRRRLVQTTLFPHKPP-----EPVEKNDKEDERHEDY-S 54

Query: 113 DAENHRKKRKPKGKSTPRKKGSKNSTPKKNASAN-ENKVSASQNVFADPVP------DLR 165
           DAENH+K++KPK K+TPRKK SKN+TPKKNASAN  NK S S+ V AD  P      DL 
Sbjct: 55  DAENHKKRKKPKAKTTPRKKASKNATPKKNASANGTNKGSTSRQVLADYDPVNATEHDLF 114

Query: 166 LEAKLSAEENSRMFAGRQVHPFFSSCKAGKKIQEIPEPGSNLCKAKSEDERITCGPIHVF 225
           LEAKL+AEE+SR+FAGRQ+HPFFS  KAGKK+Q++ + GSNL   KSE+ER TCGPIHVF
Sbjct: 115 LEAKLAAEEDSRIFAGRQIHPFFSLWKAGKKVQDMADSGSNLSTTKSEEERTTCGPIHVF 174

Query: 226 ENIKDDTSSLDWRNWTFLGNTTSENCGPESSNSSVLEGSAESLNFKMLLSTLDPSGASVF 285
           EN +DDT SLDWRNW FL NTT+ N GPE  NSSVLE                  G S+ 
Sbjct: 175 ENTQDDTPSLDWRNWAFLENTTTMNYGPEILNSSVLE------------------GVSIS 216

Query: 286 QNALSSTDLLSVHQENLQETSPSNASPLAEKTKCPQMPKDDK-----VDLEVDECV-NFV 339
           QNALSS D L +H ENL+E SPS+++ LAEKT CP   +D K      DLEVDE V   V
Sbjct: 217 QNALSS-DRLCIHPENLEEVSPSDSASLAEKT-CPPTCEDAKQLCCFQDLEVDESVTTTV 274

Query: 340 QAGIFRKSDSEPLSRFLQE-SMRSYYRTYENKAEGSLWTYKYRPTKAVEVCGNDESVNFL 398
           QAGIFRKSD+EP SRFLQE S+++  +    KAE SLWTYKY+PTKAVEVCGNDESVNFL
Sbjct: 275 QAGIFRKSDTEPPSRFLQERSLQNESQKIAYKAENSLWTYKYKPTKAVEVCGNDESVNFL 334

Query: 399 RDWLHLWRERRYAGRKATXXXXXXXXXXXXXXXXXXXXXXXXXXXMNEEDSLQNVLLITG 458
           RDWLHLW ERRY  RK                             +NEEDSLQNVLLITG
Sbjct: 335 RDWLHLWHERRYKSRKDI-SDMDKSDMRDVDDDYKCSCSDYDSEDINEEDSLQNVLLITG 393

Query: 459 PVGSGKSAAVYACAQEQGFDILELNASDCRNGAVVKQYFGDTLSSHGFKRL--------- 509
           P+GSGKSAAVYACA+EQ F+ILELNASDCRNG  V+ YFGDTL S GFKR          
Sbjct: 394 PIGSGKSAAVYACAEEQRFEILELNASDCRNGTAVRNYFGDTLGSLGFKRFANLLYQCLP 453

Query: 510 ---------------------------------SEHTASSQKKAMKLPPAAPLLNVQATD 536
                                            SE T+SSQKK  KL PA+ L + +A D
Sbjct: 454 IASNLLELITHCKKLLLTCSAIIYYLMCIYFRASEITSSSQKKTTKLSPASALQSGKAAD 513

Query: 537 EVNEGVVELIAISDDEAQSSGGTSRKLLDKNNVVASDKFQTLILVEDVDILFPEDRGCIA 596
           EVN+GV ELI ISDDEA    G+S+KLL KNN              DVDIL PEDRGCIA
Sbjct: 514 EVNDGVNELITISDDEAHIPSGSSQKLLGKNN--------------DVDILSPEDRGCIA 559

Query: 597 AIQQIAESARGPIILTSNS 615
           AIQQIAE+A+GPIILTSNS
Sbjct: 560 AIQQIAETAKGPIILTSNS 578


>Glyma04g42920.1 
          Length = 990

 Score =  546 bits (1408), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/484 (61%), Positives = 340/484 (70%), Gaps = 42/484 (8%)

Query: 137 STPKKNASANENKVSASQNVFADPVPDLRLEAKLSAEENSRMFAGRQVHPFFSSCKAGKK 196
           +TP+K AS    KV A  +    PV DL LEAKL+AEE+SR+F GRQ+HPFFS  KAGKK
Sbjct: 11  TTPRKKAS----KVLADSDRVIAPVHDLFLEAKLAAEEDSRIFTGRQIHPFFSLWKAGKK 66

Query: 197 IQEIPEPGSNLCKAKSEDERITCGPIHVFENIKDDTSSLDWRNWTFLGNTTSENCGPESS 256
           +Q++ + GSNL   KSEDER TCGPIHVFEN +DDTSSLDWRNWTFL NTTS N G ES 
Sbjct: 67  VQDVADSGSNLSTTKSEDERTTCGPIHVFENTQDDTSSLDWRNWTFLENTTSMNYGSESL 126

Query: 257 NSSVLEGSAESLNFKMLLSTLDPSGASVFQNALSSTDLLSVHQENLQETSPSNASPLAEK 316
           NSSVLE S ESLNF  L S+L PSG S+ QN+LSS D L +H ENL+E SPSN++ LA++
Sbjct: 127 NSSVLEASVESLNFDKLRSSLYPSGTSISQNSLSS-DRLCIHPENLEELSPSNSASLAKQ 185

Query: 317 TKCPQMPKDDKVDLEVDE-CVNFVQAGIFRKSDSEPLSRFLQE-SMRSYYRTYENKAEGS 374
           T          VDLEVDE     VQAGIFRKSD+EP  RFLQE ++++  +    KAE S
Sbjct: 186 T---------FVDLEVDESATTTVQAGIFRKSDTEPPIRFLQERNLQNESQKIAYKAENS 236

Query: 375 LWTYKYRPTKAVEVCGNDESVNFLRDWLHLWRERRYAGRK--ATXXXXXXXXXXXXXXXX 432
           LWTYKY+PTKAVEVCGNDESVNFLRDWLHLW ERRY  RK  +                 
Sbjct: 237 LWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSRKDISDMDKSDMRDVGDDDDDY 296

Query: 433 XXXXXXXXXXXMNEEDSLQNVLLITGPVGSGKSAAVYACAQEQGFDILELNASDCRNGAV 492
                      +NEEDSLQNVLLITGP+GSGKSAAVYACA+EQGF+ILELNASDCRNG  
Sbjct: 297 KCSYSDYDSEDINEEDSLQNVLLITGPIGSGKSAAVYACAEEQGFEILELNASDCRNGTA 356

Query: 493 VKQYFGDTLSSHGFKRLSEHTASSQKKAMKLPPAAPLLNVQATDEVNEGVVELIAISDDE 552
           V+ YFGD L S GFK                       + +A DEVN+GV ELI I DDE
Sbjct: 357 VRNYFGDALGSLGFK-----------------------SGKAADEVNDGVDELITIPDDE 393

Query: 553 AQSSGGTSRKLLDKNNVVAS-DKFQTLILVEDVDILFPEDRGCIAAIQQIAESARGPIIL 611
           A    G+ +KLL KNNVVAS DK QTLIL+EDVDIL PEDRGCIAAIQQIAE+A+GPIIL
Sbjct: 394 AHIPSGSLQKLLGKNNVVASCDKVQTLILIEDVDILSPEDRGCIAAIQQIAETAKGPIIL 453

Query: 612 TSNS 615
           TSNS
Sbjct: 454 TSNS 457


>Glyma14g23550.1 
          Length = 398

 Score =  321 bits (822), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 185/354 (52%), Positives = 228/354 (64%), Gaps = 8/354 (2%)

Query: 111 CGDAENHRKKRKPKGKSTPRKKGSKNSTPKKNASANENKVSASQNVFADPVPDLRLEAKL 170
           C  A  + KKRK   K TPRK+ SKNSTPKKN++  +N  +      A  + DLRLEAKL
Sbjct: 21  CSPAAENTKKRKSSAKLTPRKRASKNSTPKKNSTPKKNGSAVGSPDSAWKI-DLRLEAKL 79

Query: 171 SAEENSRMFAGRQVHPFFSSCKAGKKIQEIPEPGSNLCKAKSEDERITCGPIHVFENIKD 230
           SAEE+SRMFAGR++HPFFS  K  K+ Q        L   K E   ITCGPIH+FEN++D
Sbjct: 80  SAEEDSRMFAGRKIHPFFSLWKVEKQNQGQEHA---LSAVKREGRGITCGPIHIFENVQD 136

Query: 231 DTSSLDWRNWTFLGNTTSENCGPESSNSSVLEGSAESLNFKMLLSTLDPSGASVFQNALS 290
             S LDW +WTFL  TT  + G ESSN  V+EGS ESLNF  L S++ PS AS   NA+S
Sbjct: 137 GASPLDWSDWTFLDKTTVADFGTESSNLFVMEGSIESLNFDNLPSSIRPSSASSSHNAMS 196

Query: 291 STDLLSVHQENLQETSPSNASPLA-EKTKCPQMPKDDKVDL--EVDECVNFVQAGIFRKS 347
            +  LS+  +++ E SP N++ LA E+   P  P+D KVDL  EV+E       GIFRKS
Sbjct: 197 CSSQLSIQPDSMLEISPPNSAVLANEQAIWPLKPEDAKVDLDLEVNENTFSGHQGIFRKS 256

Query: 348 DSEPLSRFLQESMRSYYRTYENKAEGSLWTYKYRPTKAVEVCGNDESVNFLRDWLHLWRE 407
           D+EPLS+FLQESMRSYY + + KAE SLW +KY+PTKA EVCGN+E++NFLRDWLHLW E
Sbjct: 257 DTEPLSKFLQESMRSYYHSCKGKAESSLWIHKYKPTKAFEVCGNEEAMNFLRDWLHLWHE 316

Query: 408 RRYAGRKATXXXXXXXXXXXXXXXXXXXXXXXXXXXMNEEDSLQNVLLITGPVG 461
           RRY  RK +                           +NE+DSLQNVLLITGP+G
Sbjct: 317 RRYPCRKGS-SNRDQSNRQDDGDNYICSDSDYASEDINEKDSLQNVLLITGPIG 369


>Glyma13g03190.1 
          Length = 301

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 6/96 (6%)

Query: 525 PAAPLLN--VQATDEVNEGVVELIAISDDEA----QSSGGTSRKLLDKNNVVASDKFQTL 578
           P +PL N  ++   E    +V L  +S  E+    +S GG S +L  K+NV      QTL
Sbjct: 27  PVSPLENESMEFNIEFLHYMVFLFNLSLIESSYSSRSHGGISPRLHGKSNVFTCGSVQTL 86

Query: 579 ILVEDVDILFPEDRGCIAAIQQIAESARGPIILTSN 614
           ILVEDVD+LF EDRGCIAAIQ I+E+A+GPIILTSN
Sbjct: 87  ILVEDVDMLFLEDRGCIAAIQHISETAKGPIILTSN 122