Miyakogusa Predicted Gene

Lj1g3v0796420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0796420.1 Non Chatacterized Hit- tr|B1XM46|B1XM46_SYNP2
Putative uncharacterized protein OS=Synechococcus sp.
,45.65,2e-16,DUF836,Glutaredoxin-like; seg,NULL; no
description,Thioredoxin-like fold;
Thioredoxin-like,Thioredox,CUFF.26350.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g43020.1                                                       183   4e-47
Glyma06g11720.1                                                       166   6e-42
Glyma04g43020.2                                                       148   1e-36

>Glyma04g43020.1 
          Length = 138

 Score =  183 bits (465), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 93/125 (74%), Positives = 102/125 (81%), Gaps = 3/125 (2%)

Query: 18  RPSSPISPLTRHSTFRFRTLSCSS---EPSRKLILYSKPGCCLCDGLKEKLHAAFLLSGP 74
           RPSSP+  L   + F+FR LS SS    PSRKL+LYSKPGCCLCDGLKEKL AAFLL G 
Sbjct: 14  RPSSPLFLLRGQTAFKFRPLSSSSFGAAPSRKLVLYSKPGCCLCDGLKEKLQAAFLLLGT 73

Query: 75  DSLTDVHLQVRDITSNPEWESAYQYEIPVLAKVLSDGTEKTLPRLSPRLGVLHVQKKIAA 134
           DSL  V LQ+RDIT+NPEWE+AYQYEIPVLAKVLSDGTE  LPRLSPRLGV  +QKKIAA
Sbjct: 74  DSLHGVDLQIRDITTNPEWENAYQYEIPVLAKVLSDGTEVALPRLSPRLGVELLQKKIAA 133

Query: 135 ALREQ 139
           AL +Q
Sbjct: 134 ALSQQ 138


>Glyma06g11720.1 
          Length = 137

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 99/123 (80%), Gaps = 2/123 (1%)

Query: 19  PSSPISPLTRHSTFRFRTLSCSSEPSRK--LILYSKPGCCLCDGLKEKLHAAFLLSGPDS 76
           PSSP+  L     F+FR  S SS  +    L+LYSKPGCCLCDGLKEKLHAAFLLSG DS
Sbjct: 15  PSSPLLLLRGQKVFKFRPFSSSSSAAPSRKLVLYSKPGCCLCDGLKEKLHAAFLLSGTDS 74

Query: 77  LTDVHLQVRDITSNPEWESAYQYEIPVLAKVLSDGTEKTLPRLSPRLGVLHVQKKIAAAL 136
           L DV LQ+RDIT+NPEWE+AYQYEIPVLAKVLSDGTE  LPRLSPRLGV  +QKKIAAAL
Sbjct: 75  LHDVDLQIRDITTNPEWENAYQYEIPVLAKVLSDGTEVALPRLSPRLGVELLQKKIAAAL 134

Query: 137 REQ 139
            +Q
Sbjct: 135 NQQ 137


>Glyma04g43020.2 
          Length = 124

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 81/99 (81%), Gaps = 3/99 (3%)

Query: 18  RPSSPISPLTRHSTFRFRTLSCSS---EPSRKLILYSKPGCCLCDGLKEKLHAAFLLSGP 74
           RPSSP+  L   + F+FR LS SS    PSRKL+LYSKPGCCLCDGLKEKL AAFLL G 
Sbjct: 14  RPSSPLFLLRGQTAFKFRPLSSSSFGAAPSRKLVLYSKPGCCLCDGLKEKLQAAFLLLGT 73

Query: 75  DSLTDVHLQVRDITSNPEWESAYQYEIPVLAKVLSDGTE 113
           DSL  V LQ+RDIT+NPEWE+AYQYEIPVLAKVLSDGTE
Sbjct: 74  DSLHGVDLQIRDITTNPEWENAYQYEIPVLAKVLSDGTE 112