Miyakogusa Predicted Gene

Lj1g3v0786160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0786160.1 Non Chatacterized Hit- tr|F6H0T3|F6H0T3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.61,6e-18,seg,NULL,NODE_60388_length_627_cov_30.905901.path2.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11650.1                                                        51   5e-07

>Glyma06g11650.1 
          Length = 430

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 5   QKSQTKLTRTQSSLLVSSSPTLRSSIHNFSSIIIKDEQQQHVAAASSHRHEEADNDDKKT 64
           QKS +KLTR  SSLL       RSS+HN SSII + E +Q +        ++     K  
Sbjct: 4   QKSGSKLTRNHSSLL-------RSSVHNLSSIITQHEHEQQLLLDVHDDDDKNKKPKKPH 56

Query: 65  KKPLINPTRSHKWIHYPTGSTRLSNPILAVVSFGFLGACSLWFYIQTGEVRPTSENXXXX 124
            +       +             S+   A+  F FLGACSL FY    EV  +SEN    
Sbjct: 57  VQAQAQAHHAQA-------LAHRSSAYSALAVF-FLGACSLLFYFFYLEV-SSSENFLLA 107

Query: 125 XXXXXXXXXXXSRNKRLIHHAVSLVK 150
                      S+NK LIH + SL K
Sbjct: 108 LIFVAVALYFVSKNKGLIHRSFSLAK 133