Miyakogusa Predicted Gene
- Lj1g3v0765570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0765570.1 tr|A9P9Z6|A9P9Z6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1092563 PE=2
SV=1,69.12,2e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; Ras,Small GTPase superfamily; no
descript,gene.g30237.t1.1
(66 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g34120.2 128 1e-30
Glyma20g33440.1 128 2e-30
Glyma10g34120.1 127 2e-30
Glyma10g06780.1 86 1e-17
Glyma03g34330.1 85 2e-17
Glyma19g37020.1 84 5e-17
Glyma13g20970.1 82 9e-17
Glyma14g26690.1 72 1e-13
Glyma13g09260.1 71 2e-13
Glyma05g32520.3 67 5e-12
Glyma05g32520.2 67 5e-12
Glyma08g16680.1 67 6e-12
Glyma05g32520.1 66 1e-11
Glyma04g39030.1 60 7e-10
Glyma06g15950.1 59 8e-10
>Glyma10g34120.2
Length = 190
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQKQKHLYETPQ 60
MALA++HRCLFLECSAKTRENVQQCFNDLTLKIL+VP LREKGSV VKRQKQKH+YET Q
Sbjct: 125 MALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVPGLREKGSVAVKRQKQKHIYETSQ 184
Query: 61 SGGCCS 66
S GCCS
Sbjct: 185 SAGCCS 190
>Glyma20g33440.1
Length = 117
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 64/66 (96%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQKQKHLYETPQ 60
MALA++HRCLFLECSAKTRENVQQCFNDLTLKIL+VPSLRE+GSV VKRQKQKH+YET +
Sbjct: 52 MALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVPSLRERGSVAVKRQKQKHIYETSK 111
Query: 61 SGGCCS 66
SGGCCS
Sbjct: 112 SGGCCS 117
>Glyma10g34120.1
Length = 212
Score = 127 bits (319), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQKQKHLYETPQ 60
MALA++HRCLFLECSAKTRENVQQCFNDLTLKIL+VP LREKGSV VKRQKQKH+YET Q
Sbjct: 147 MALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVPGLREKGSVAVKRQKQKHIYETSQ 206
Query: 61 SGGCCS 66
S GCCS
Sbjct: 207 SAGCCS 212
>Glyma10g06780.1
Length = 212
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQKQKHLYETPQ 60
+ALA+E CLF ECSAKTRENV++CF +L LKI+EVPSL E+GS VKR K E PQ
Sbjct: 144 LALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAVKRNILKQQQEQPQ 203
Query: 61 S---GGCCS 66
+ GGCCS
Sbjct: 204 ASEFGGCCS 212
>Glyma03g34330.1
Length = 211
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYET 58
+ALAKE CL LECSAKTRENV+QCF +L LKI+E PSL E+GS VKR K K +
Sbjct: 144 LALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAVKRSVLKPKQESQA 203
Query: 59 PQSGGCCS 66
Q+GGCCS
Sbjct: 204 SQNGGCCS 211
>Glyma19g37020.1
Length = 211
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYET 58
+ALAK+ CL LECSAKTRENV+QCF +L LKI+E PSL E+GS VKR K K +
Sbjct: 144 LALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAVKRSVLKPKQESQA 203
Query: 59 PQSGGCCS 66
Q+GGCCS
Sbjct: 204 SQNGGCCS 211
>Glyma13g20970.1
Length = 211
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYET 58
+ALA+E CLF ECSAKTRENV++CF +L LKI+EVPSL E+GS VKR KQ+ +
Sbjct: 144 LALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAVKRNILKQQQQPQA 203
Query: 59 PQSGGCCS 66
+ GGCCS
Sbjct: 204 SEFGGCCS 211
>Glyma14g26690.1
Length = 214
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 3 LAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYETPQ 60
A+E+ CL+ ECSAKTR NV QCF++L +KILE PSL +GS VK+ KQK
Sbjct: 148 FAREYGCLYTECSAKTRVNVTQCFDELVMKILETPSLLAEGSSGVKKNIFKQKPPLSDAS 207
Query: 61 SGGCCS 66
S GCCS
Sbjct: 208 SSGCCS 213
>Glyma13g09260.1
Length = 215
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 3 LAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYETPQ 60
A+E+ CL+ ECSAKTR NV QCF++L +KILE PSL +GS VK+ KQK
Sbjct: 149 FAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEGSSGVKKNIFKQKPPQSDAS 208
Query: 61 SGGCCS 66
S GCCS
Sbjct: 209 SSGCCS 214
>Glyma05g32520.3
Length = 209
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 LAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYETPQ 60
A+E+ CLF+ECSAKTR NVQQCF +L LKIL+ PSL +GS VK+ K++
Sbjct: 145 FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKERPPQSDAS 204
Query: 61 SGGCC 65
+ CC
Sbjct: 205 TSSCC 209
>Glyma05g32520.2
Length = 209
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 3 LAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYETPQ 60
A+E+ CLF+ECSAKTR NVQQCF +L LKIL+ PSL +GS VK+ K++
Sbjct: 145 FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKERPPQSDAS 204
Query: 61 SGGCC 65
+ CC
Sbjct: 205 TSSCC 209
>Glyma08g16680.1
Length = 209
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 3 LAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQ--KQKHLYETPQ 60
A+E+ CLF+ECSAKTR NVQQCF +L LKIL+ PSL +GS VK+ K +
Sbjct: 145 FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKDRPPQSDAS 204
Query: 61 SGGCC 65
+ CC
Sbjct: 205 ASSCC 209
>Glyma05g32520.1
Length = 213
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQKQKHLYETPQ 60
+ A+E+ CLF+ECSAKTR NVQQCF +L LKIL+ PSL +GS VK+ K PQ
Sbjct: 147 IDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLIAEGSKGVKKNIFKE--RPPQ 204
Query: 61 SGGCCS 66
S S
Sbjct: 205 SDASTS 210
>Glyma04g39030.1
Length = 207
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 9/68 (13%)
Query: 3 LAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGSVVVKRQKQKHLY-----E 57
A+E CLF+ECSAKTR NVQQCF +L LKIL+ PSL +GS + +K+++ +
Sbjct: 144 FARECGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS----KGNKKNIFKDKPSQ 199
Query: 58 TPQSGGCC 65
T + CC
Sbjct: 200 TNATSSCC 207
>Glyma06g15950.1
Length = 207
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 1 MALAKEHRCLFLECSAKTRENVQQCFNDLTLKILEVPSLREKGS 44
+ A+E CLF ECSAKTR NVQQCF +L LKIL+ PSL +GS
Sbjct: 142 IDFARECGCLFTECSAKTRANVQQCFEELVLKILDTPSLLAEGS 185