Miyakogusa Predicted Gene

Lj1g3v0751200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0751200.1 Non Chatacterized Hit- tr|I1KA37|I1KA37_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19258 PE,81.01,0,Domain
present in VPS9,Vacuolar sorting protein 9, subgroup; VPS9,Vacuolar
sorting protein 9; SUBFAM,CUFF.26262.1
         (412 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11340.1                                                       623   e-178
Glyma06g11340.2                                                       596   e-170
Glyma04g43330.1                                                       570   e-163
Glyma04g13010.1                                                       219   3e-57

>Glyma06g11340.1 
          Length = 467

 Score =  623 bits (1607), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/400 (77%), Positives = 340/400 (85%), Gaps = 5/400 (1%)

Query: 1   MEAAFKAHPLWAGCXXXXXXXXXXXXXKYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQ 60
           MEA F+AHPLWAGC             KYVMTKLF+RVFASLP+DVKFDDQ+SEKM LIQ
Sbjct: 57  MEADFRAHPLWAGCSEEELESAGEGLEKYVMTKLFARVFASLPDDVKFDDQLSEKMALIQ 116

Query: 61  QFIRPENLDIMPAFQNETSWLLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLA 120
           QFIRPENLDI P FQNE+SWLLAQKELQKINMYKAPRDKL+CILNCC+VI NLLLNAS+A
Sbjct: 117 QFIRPENLDIKPVFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCRVISNLLLNASVA 176

Query: 121 SKENPPGADEFLPVLIYVTIKANPPQLHSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESF 180
           S+ENPPGADEFLPVLIYVTIKANPPQLHSNL YIQRFR Q+RL  EAAYYFTNMLSAESF
Sbjct: 177 SRENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRFRHQSRLVAEAAYYFTNMLSAESF 236

Query: 181 ISNIDAKAISMDETEFERNMEFSRALLSGLSVDTQDPNSPYQNYGQHPRAEPAKHRNKAL 240
           ISNIDAKAISM+E EF+ NMEF+RA+LSG+S DTQDP SPYQN GQHPRAEP KH  KAL
Sbjct: 237 ISNIDAKAISMEEAEFDGNMEFARAMLSGISADTQDPGSPYQNDGQHPRAEPTKH--KAL 294

Query: 241 NDNKDPTLRTPSSVAKSESKRVSFSDELLITKVPSLSDLENKGASMILKEDKLNEIFGEF 300
           NDN DP LRTPSSVAKSESK+V+F++E LITKVPSLSDLENKGASMILKEDKLNE+FGEF
Sbjct: 295 NDNNDPALRTPSSVAKSESKKVTFANESLITKVPSLSDLENKGASMILKEDKLNEVFGEF 354

Query: 301 PYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLGVXXXXXXXXXXXDHVE--SETTL 358
           PYLFASVGDL VGDVEDLLNNYKQLVFKYVSLSKGLG+           ++ E  +ETT+
Sbjct: 355 PYLFASVGDLMVGDVEDLLNNYKQLVFKYVSLSKGLGISPTSLPPSNSQNNSEDHAETTI 414

Query: 359 DSSEGESVGAIDEPEKSIDTMEDSSEKVSPLEEAKSESDL 398
           DSS+   +    + E+SIDT +DSS+KV+ LEE K ESDL
Sbjct: 415 DSSDNGPLDDNSKSEESIDTTDDSSDKVT-LEEQKIESDL 453


>Glyma06g11340.2 
          Length = 427

 Score =  596 bits (1537), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 296/373 (79%), Positives = 327/373 (87%), Gaps = 5/373 (1%)

Query: 28  KYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQQFIRPENLDIMPAFQNETSWLLAQKEL 87
           KYVMTKLF+RVFASLP+DVKFDDQ+SEKM LIQQFIRPENLDI P FQNE+SWLLAQKEL
Sbjct: 44  KYVMTKLFARVFASLPDDVKFDDQLSEKMALIQQFIRPENLDIKPVFQNESSWLLAQKEL 103

Query: 88  QKINMYKAPRDKLICILNCCKVIGNLLLNASLASKENPPGADEFLPVLIYVTIKANPPQL 147
           QKINMYKAPRDKL+CILNCC+VI NLLLNAS+AS+ENPPGADEFLPVLIYVTIKANPPQL
Sbjct: 104 QKINMYKAPRDKLVCILNCCRVISNLLLNASVASRENPPGADEFLPVLIYVTIKANPPQL 163

Query: 148 HSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESFISNIDAKAISMDETEFERNMEFSRALL 207
           HSNL YIQRFR Q+RL  EAAYYFTNMLSAESFISNIDAKAISM+E EF+ NMEF+RA+L
Sbjct: 164 HSNLLYIQRFRHQSRLVAEAAYYFTNMLSAESFISNIDAKAISMEEAEFDGNMEFARAML 223

Query: 208 SGLSVDTQDPNSPYQNYGQHPRAEPAKHRNKALNDNKDPTLRTPSSVAKSESKRVSFSDE 267
           SG+S DTQDP SPYQN GQHPRAEP KH  KALNDN DP LRTPSSVAKSESK+V+F++E
Sbjct: 224 SGISADTQDPGSPYQNDGQHPRAEPTKH--KALNDNNDPALRTPSSVAKSESKKVTFANE 281

Query: 268 LLITKVPSLSDLENKGASMILKEDKLNEIFGEFPYLFASVGDLTVGDVEDLLNNYKQLVF 327
            LITKVPSLSDLENKGASMILKEDKLNE+FGEFPYLFASVGDL VGDVEDLLNNYKQLVF
Sbjct: 282 SLITKVPSLSDLENKGASMILKEDKLNEVFGEFPYLFASVGDLMVGDVEDLLNNYKQLVF 341

Query: 328 KYVSLSKGLGVXXXXXXXXXXXDHVE--SETTLDSSEGESVGAIDEPEKSIDTMEDSSEK 385
           KYVSLSKGLG+           ++ E  +ETT+DSS+   +    + E+SIDT +DSS+K
Sbjct: 342 KYVSLSKGLGISPTSLPPSNSQNNSEDHAETTIDSSDNGPLDDNSKSEESIDTTDDSSDK 401

Query: 386 VSPLEEAKSESDL 398
           V+ LEE K ESDL
Sbjct: 402 VT-LEEQKIESDL 413


>Glyma04g43330.1 
          Length = 443

 Score =  570 bits (1470), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 291/398 (73%), Positives = 316/398 (79%), Gaps = 25/398 (6%)

Query: 1   MEAAFKAHPLWAGCXXXXXXXXXXXXXKYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQ 60
           MEA F AHPLWAGC             KYVMTKLF+RVFASLP+DVKFDDQ+SEKM LIQ
Sbjct: 57  MEADFSAHPLWAGCSEEELASAGEGLEKYVMTKLFARVFASLPDDVKFDDQLSEKMALIQ 116

Query: 61  QFIRPENLDIMPAFQNETSWLLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLA 120
           QFIRPENLDI PAFQNE+SWLLAQKELQKINMYKAPRDKL+CILNCC+VI NLLLNAS+A
Sbjct: 117 QFIRPENLDIKPAFQNESSWLLAQKELQKINMYKAPRDKLVCILNCCRVISNLLLNASVA 176

Query: 121 SKENPPGADEFLPVLIYVTIKANPPQLHSNLQYIQRFRRQTRLAGEAAYYFTNMLSAESF 180
           S+ENPPGADEFLPVLIYVTIKANPPQLHSNL YIQRFR Q+RL  EAAYYFTNMLSAESF
Sbjct: 177 SRENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRFRHQSRLVAEAAYYFTNMLSAESF 236

Query: 181 ISNIDAKAISMDETEFERNMEFSRALLSGLSVDTQDPNSPYQNYGQHPRAEPAKHRNKAL 240
           ISNIDAKAISMDE EFE NMEF+RA+LS                      EP KH  KAL
Sbjct: 237 ISNIDAKAISMDEAEFEGNMEFARAMLS----------------------EPTKH--KAL 272

Query: 241 NDNKDPTLRTPSSVAKSESKRVSFSDELLITKVPSLSDLENKGASMILKEDKLNEIFGEF 300
            D+ DP LRTPSSV KSESK+V+F+DE LITKVPSLSDLENKGASMILKEDKLN +FGEF
Sbjct: 273 IDHNDPALRTPSSVVKSESKKVTFADESLITKVPSLSDLENKGASMILKEDKLNAVFGEF 332

Query: 301 PYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLGVXXXXXXXXXXXDHVESETTLDS 360
           PYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLG+           D+ E    +DS
Sbjct: 333 PYLFASVGDLTVGDVEDLLNNYKQLVFKYVSLSKGLGISPTSLPPSNSQDNSEGHAEVDS 392

Query: 361 SEGESVGAIDEPEKSIDTMEDSSEKVSPLEEAKSESDL 398
           S+G  +   ++ E+SIDT EDSS+KVS LEE K ES L
Sbjct: 393 SDGGPLDDNNKSEESIDTTEDSSDKVS-LEERKIESGL 429


>Glyma04g13010.1 
          Length = 411

 Score =  219 bits (559), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 108/230 (46%), Positives = 151/230 (65%), Gaps = 27/230 (11%)

Query: 1   MEAAFKAHPLWAGCXXXXXXXXXXXXXKYVMTKLFSRVFASLPNDVKFDDQISEKMGLIQ 60
           MEAA + H LW                KY+MTKLFSR F++   D K D++IS K+ L+Q
Sbjct: 66  MEAAIRDHSLWTTASEEDIDCAMQGLEKYIMTKLFSRTFSASAEDAKIDNEISSKICLLQ 125

Query: 61  QFIRPENLDIMPAFQNETSWLLAQKELQKINMYKAPRDKLICILNCCKVIGNLLLNASLA 120
            F++PE+LDI P  QNE  WLLA+KEL KIN +KAP +KL+ I+NCC++I NLLLNA++ 
Sbjct: 126 TFLKPEHLDIPPILQNEALWLLAEKELLKINAFKAPHEKLLSIMNCCRIINNLLLNAAM- 184

Query: 121 SKENPPGADEFLPVLIYVTIK--------------------------ANPPQLHSNLQYI 154
           S+  P GAD FLPVLIYVTIK                          ANPP+LHSNL++I
Sbjct: 185 SEYVPAGADGFLPVLIYVTIKASPPWPIESTLHYPLTRVDYFFVCVCANPPKLHSNLKFI 244

Query: 155 QRFRRQTRLAGEAAYYFTNMLSAESFISNIDAKAISMDETEFERNMEFSR 204
           + + RQ +L  EA YYFTN++SA++FI +++AK++SMDE +++ +M+ ++
Sbjct: 245 KLYTRQAKLISEAEYYFTNLVSAKTFIVDLNAKSLSMDEIKYKESMQAAK 294