Miyakogusa Predicted Gene

Lj1g3v0715500.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0715500.3 tr|D7MBR7|D7MBR7_ARALL La domain-containing
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,36.65,2e-18,OS03G0859300 PROTEIN,NULL; LUPUS LA
PROTEIN-RELATED,NULL; seg,NULL,CUFF.26200.3
         (298 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05090.1                                                       176   3e-44
Glyma16g23170.1                                                       132   6e-31
Glyma11g08500.1                                                       125   4e-29
Glyma01g36800.1                                                        99   7e-21
Glyma17g37950.1                                                        58   1e-08

>Glyma02g05090.1 
          Length = 472

 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/198 (54%), Positives = 125/198 (63%), Gaps = 22/198 (11%)

Query: 53  NNANGGKRPAWNKPSNAASSSVMGADSWPALSKSAHSPAKSLPEXXXXXXXXXXXXXNLQ 112
           NN   GKRPAWNKPSNAASSSV+GADSWP  ++SA +P KS                  +
Sbjct: 61  NNVITGKRPAWNKPSNAASSSVIGADSWPLPAESARAPTKS----------PSPSPSPSE 110

Query: 113 GTGSATPSPQRQVRDNAGVNNTLPTQQKPYKRXXXXXXXXX-XXXPQHSGNQGSVAATGS 171
            T ++T        D + +   L T QK +KR             PQ SG QG +A  GS
Sbjct: 111 MTKTST--------DISSLPPPLQTHQKSFKRSNSNTSSNGGHHPPQMSGPQGPIAPAGS 162

Query: 172 HSHNSSQKDHHQQRTGFVSNDHPPQQRNSYRNRNGGGPHQRGDGAHHHNYGGRRDQD-RG 230
           H++NSS K+H Q R GF  NDH PQ RNS+R RNGGGPHQRGDG HHHNYGGRRDQD RG
Sbjct: 163 HNYNSSPKEH-QPRAGFFPNDHLPQ-RNSFRYRNGGGPHQRGDGHHHHNYGGRRDQDHRG 220

Query: 231 NQDWNNQRNFNGRDNYMS 248
           NQDWNN R+FNGRDN+MS
Sbjct: 221 NQDWNNHRSFNGRDNFMS 238


>Glyma16g23170.1 
          Length = 433

 Score =  132 bits (331), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/205 (47%), Positives = 105/205 (51%), Gaps = 58/205 (28%)

Query: 54  NANGGKRPAWNKPSNAASSSVMGADSWPALSKSAHSPAKSLP------EXXXXXXXXXXX 107
           NA+ GKR AW KPS AASSSVMGADSWP  S+SA +PAKS        E           
Sbjct: 46  NADTGKRAAWIKPSTAASSSVMGADSWPLPSESARAPAKSPSPSLSPSELVKASTDTSSV 105

Query: 108 XXNLQGTGSATPSPQRQVRDNAGVNNTLPTQQ---KPYKRXXXXXXXXXXXXPQHSGNQG 164
              LQG GS TPSP R VRDNA  NN   T Q   K +KR                    
Sbjct: 106 PPPLQGPGSLTPSPHRNVRDNANANNNNNTGQTHPKSFKR-------------------- 145

Query: 165 SVAATGSHSHNSSQKDHHQQRTGFVSNDHPPQQRNSYRNRNGGGPHQRGDGAHHHN-YGG 223
                 S+S+  S   H                      RNGGGPHQRGDG HHHN YGG
Sbjct: 146 ------SNSNTYSNGGH----------------------RNGGGPHQRGDGHHHHNNYGG 177

Query: 224 RRDQDRGNQDWNNQRNFNGRDNYMS 248
           RRDQD GNQDWNN RNFNGRDN+MS
Sbjct: 178 RRDQDPGNQDWNNHRNFNGRDNFMS 202


>Glyma11g08500.1 
          Length = 510

 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/221 (44%), Positives = 119/221 (53%), Gaps = 50/221 (22%)

Query: 51  TENNANGG--KRPAWNKPS-----NAASSSV---MGADSWPALSKSAHSPAKSLPEXXXX 100
           TE++ NGG  KRP WNKPS      AA+S V   M A+SWP  S+S  +  KS       
Sbjct: 67  TESSDNGGAAKRPVWNKPSPNGAAAAAASEVRPEMDANSWPLPSESTRAATKS------- 119

Query: 101 XXXXXXXXXNLQGTGSATPSPQ--------------RQVRDNAGVNNTLPTQQKPYKRXX 146
                    +L+G    +  PQ              R+V DNA  N+ +P +QK  K   
Sbjct: 120 --------ESLKGLLDGSSVPQSQGLGSMSSSSPSQREVSDNASTNSVVPARQKSTKHHS 171

Query: 147 XXXXXXXXXXPQHSGNQGSVAATGSHSHNSSQKDHHQQRTGFVSNDHPPQQRNSYRNRNG 206
                      QHS +Q S+AATGS   NSS KDH  QR+GF S+DHP QQRNS+RNRNG
Sbjct: 172 SNASSNGGHM-QHSASQVSIAATGSR--NSSPKDH-TQRSGFASHDHP-QQRNSFRNRNG 226

Query: 207 GGPHQRGDGAHHHNYGGRRDQDRGNQDWNNQRNFNGRDNYM 247
           G  HQRGDG+HHHNYG R D     QDWNN R F  RD ++
Sbjct: 227 GQ-HQRGDGSHHHNYGNRHD-----QDWNNNRTFGSRDTHV 261


>Glyma01g36800.1 
          Length = 334

 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 10/90 (11%)

Query: 158 QHSGNQGSVAATGSHSHNSSQKDHHQQRTGFVSNDHPPQQRNSYRNRNGGGPHQRGDGAH 217
           QHS  Q S+AATGS   NSS KDH  QR+GF SNDHP QQRNS+RNRNGG  HQRGDG+H
Sbjct: 16  QHSVPQVSIAATGSR--NSSPKDH-TQRSGFASNDHP-QQRNSFRNRNGGQ-HQRGDGSH 70

Query: 218 HHNYGGRRDQDRGNQDWNNQRNFNGRDNYM 247
           HHNYG RRD     Q+WNN R+F  RD ++
Sbjct: 71  HHNYGNRRD-----QEWNNNRSFGSRDTHV 95


>Glyma17g37950.1 
          Length = 477

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 86/229 (37%), Gaps = 43/229 (18%)

Query: 52  ENNANGGKRPAWNKPSN---AASSSVMG-ADSWPALSKSAHSPAKSLPEXXXXXXXXXXX 107
           E NA+  K+  WNKPSN     +  VMG A+SWP L  S    AK  PE           
Sbjct: 51  EGNADRSKKLVWNKPSNGVVVETGPVMGAAESWPTLLASTKGSAKLPPESSSNTVIDYGS 110

Query: 108 XXNLQGTGSATPSPQRQVRDNAGVNNT----LPTQQKPYKRXXXXXXXXXXXXPQHSGNQ 163
                    A+ SPQ+Q   NA  N+     +P +Q+  KR                GN 
Sbjct: 111 LSTSPQGPMASQSPQKQATTNAKPNSAPNYNVPGRQRSMKRVGGSSSTVSDPS---QGNF 167

Query: 164 GSVAATGSHSHNSSQKDHHQQRTGFVSNDHPPQQRNSYRNRN-------GG--------- 207
            +             +         V     P  R+ YRN N       GG         
Sbjct: 168 SNPPPPPPPPPFPVYQLPPVSYCNMVPGVPDPAPRDHYRNNNWDAGPMVGGFVPAMNGYR 227

Query: 208 --------GPHQRGDGAHHHNYGGRRD-QDRGNQDWNNQRNFNGRDNYM 247
                   GPH RGDG++H++YG RRD QDRGN         N RD ++
Sbjct: 228 GSSRRGYFGPHPRGDGSYHNSYGSRRDHQDRGNY-------VNTRDAFV 269