Miyakogusa Predicted Gene

Lj1g3v0627680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0627680.1 tr|G7KDW6|G7KDW6_MEDTR DNA polymerase beta
OS=Medicago truncatula GN=MTR_5g040170 PE=4 SV=1,81.94,0,no
description,NULL; no description,DNA-directed DNA polymerase, family
X, beta-like, N-terminal; se,CUFF.26107.1
         (519 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g07270.1                                                       781   0.0  
Glyma02g07270.2                                                       741   0.0  
Glyma02g03440.1                                                        69   2e-11

>Glyma02g07270.1 
          Length = 549

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/518 (75%), Positives = 428/518 (82%), Gaps = 16/518 (3%)

Query: 18  FKIWKQRLVQMGAVIEDRFSKRVTHLFAMDSHALLHELDSHRLSRFKGRVLLYQWLEDSL 77
           F+IWK+RLVQMGAVIE+RFSKRVTH+FAM S ALL +LD  RLSRFKGRVLLYQWLED L
Sbjct: 32  FQIWKERLVQMGAVIEERFSKRVTHVFAMHSDALLQQLDRERLSRFKGRVLLYQWLEDCL 91

Query: 78  KSGEKLPEDMYVLKLDTQDQVIPDKSVDPEPTDRSISSDPQRLQSKKMKSSSEDTQILNL 137
           KSGE L EDMY+LKLD+Q + IP+KS+DP  T++  SSD Q+L +KK K S+EDT+I+  
Sbjct: 92  KSGEILSEDMYLLKLDSQGEHIPEKSLDPGLTNQRTSSDLQQLLNKKSKLSTEDTKIVKN 151

Query: 138 DSNEDRG-ENXXXXXXXXXXXXGEVDSLSYANTRLQHLDAENEA---------------S 181
           +S++D G E               +   S+ +    H  A   +               S
Sbjct: 152 ESHDDDGKEKAVFSSTSTISSHVHITMSSFHSCIHTHTHAYQLSLVYMPITQVCSFSLKS 211

Query: 182 SLPYCPPDLNKKITEIFGKLINIYRALGDDRRSFSYHKAIAVIEKLPFKIESTDQLKNLP 241
           SL Y PPDLNK ITEIFGKL+NIYRALGDDRRSFSYHKAIAVIEKLPFKIESTDQ+ NLP
Sbjct: 212 SLSYHPPDLNKNITEIFGKLVNIYRALGDDRRSFSYHKAIAVIEKLPFKIESTDQINNLP 271

Query: 242 SIGKSMKDHIQEIITTGKLSKLEHFETDEKVRTISLFGEVWGVGPATSLKLYEKGHRTLD 301
           SIGKSMKDH+QEI+TTGKLSKLEHFETDEKVRTISLFGEVWG+GP+T+LKLYEKGHR+LD
Sbjct: 272 SIGKSMKDHVQEIMTTGKLSKLEHFETDEKVRTISLFGEVWGIGPSTALKLYEKGHRSLD 331

Query: 302 DLRNDDSLTNAQKLGLKYFDDIRQRIPRHEVQEMERILQKVGEDVLPGVLIVCGGSYRRG 361
           DLRNDDSLTNAQKLGLKYFDDI QRIPRHE QEME ILQKVGEDVLPGV+I+CGGSYRRG
Sbjct: 332 DLRNDDSLTNAQKLGLKYFDDIGQRIPRHEAQEMEHILQKVGEDVLPGVVIICGGSYRRG 391

Query: 362 KTTCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFSNHSEEGTDSGVDTYFGF 421
           K TCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFS+HSEE TDSGVDTYFGF
Sbjct: 392 KATCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFSSHSEEATDSGVDTYFGF 451

Query: 422 CTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRLEADSKGFRLDDTGLFPATM 481
           CTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRL+A+SKGFRLDDTGLFPAT 
Sbjct: 452 CTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRLQAESKGFRLDDTGLFPATQ 511

Query: 482 XXXXXXXXXXXXXLKFDTEKEVFDFLGFPWLEPHERNL 519
                        LKF+TEKE+FDFL FP LEPHERNL
Sbjct: 512 GSGGKRGAKGSASLKFNTEKEIFDFLDFPCLEPHERNL 549


>Glyma02g07270.2 
          Length = 528

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/479 (76%), Positives = 405/479 (84%), Gaps = 16/479 (3%)

Query: 18  FKIWKQRLVQMGAVIEDRFSKRVTHLFAMDSHALLHELDSHRLSRFKGRVLLYQWLEDSL 77
           F+IWK+RLVQMGAVIE+RFSKRVTH+FAM S ALL +LD  RLSRFKGRVLLYQWLED L
Sbjct: 32  FQIWKERLVQMGAVIEERFSKRVTHVFAMHSDALLQQLDRERLSRFKGRVLLYQWLEDCL 91

Query: 78  KSGEKLPEDMYVLKLDTQDQVIPDKSVDPEPTDRSISSDPQRLQSKKMKSSSEDTQILNL 137
           KSGE L EDMY+LKLD+Q + IP+KS+DP  T++  SSD Q+L +KK K S+EDT+I+  
Sbjct: 92  KSGEILSEDMYLLKLDSQGEHIPEKSLDPGLTNQRTSSDLQQLLNKKSKLSTEDTKIVKN 151

Query: 138 DSNEDRG-ENXXXXXXXXXXXXGEVDSLSYANTRLQHLDAENEA---------------S 181
           +S++D G E               +   S+ +    H  A   +               S
Sbjct: 152 ESHDDDGKEKAVFSSTSTISSHVHITMSSFHSCIHTHTHAYQLSLVYMPITQVCSFSLKS 211

Query: 182 SLPYCPPDLNKKITEIFGKLINIYRALGDDRRSFSYHKAIAVIEKLPFKIESTDQLKNLP 241
           SL Y PPDLNK ITEIFGKL+NIYRALGDDRRSFSYHKAIAVIEKLPFKIESTDQ+ NLP
Sbjct: 212 SLSYHPPDLNKNITEIFGKLVNIYRALGDDRRSFSYHKAIAVIEKLPFKIESTDQINNLP 271

Query: 242 SIGKSMKDHIQEIITTGKLSKLEHFETDEKVRTISLFGEVWGVGPATSLKLYEKGHRTLD 301
           SIGKSMKDH+QEI+TTGKLSKLEHFETDEKVRTISLFGEVWG+GP+T+LKLYEKGHR+LD
Sbjct: 272 SIGKSMKDHVQEIMTTGKLSKLEHFETDEKVRTISLFGEVWGIGPSTALKLYEKGHRSLD 331

Query: 302 DLRNDDSLTNAQKLGLKYFDDIRQRIPRHEVQEMERILQKVGEDVLPGVLIVCGGSYRRG 361
           DLRNDDSLTNAQKLGLKYFDDI QRIPRHE QEME ILQKVGEDVLPGV+I+CGGSYRRG
Sbjct: 332 DLRNDDSLTNAQKLGLKYFDDIGQRIPRHEAQEMEHILQKVGEDVLPGVVIICGGSYRRG 391

Query: 362 KTTCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFSNHSEEGTDSGVDTYFGF 421
           K TCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFS+HSEE TDSGVDTYFGF
Sbjct: 392 KATCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFSSHSEEATDSGVDTYFGF 451

Query: 422 CTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRLEADSKGFRLDDTGLFPAT 480
           CTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRL+A+SKGFRLDDTGLFPAT
Sbjct: 452 CTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRLQAESKGFRLDDTGLFPAT 510


>Glyma02g03440.1 
          Length = 156

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 38/58 (65%)

Query: 459 RLRLEADSKGFRLDDTGLFPATMXXXXXXXXXXXXXLKFDTEKEVFDFLGFPWLEPHE 516
           RL+ +A+SKGFR DDT LFP+T              LKF TEKE+FDFL  PWLEPHE
Sbjct: 88  RLKQQAESKGFRFDDTRLFPSTQPSGGKWGAKGSASLKFYTEKEIFDFLDLPWLEPHE 145