Miyakogusa Predicted Gene

Lj1g3v0579720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0579720.1 Non Chatacterized Hit- tr|B9RLH0|B9RLH0_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.67,0.000000000001,seg,NULL,CUFF.25996.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g35900.1                                                       170   5e-43

>Glyma04g35900.1 
          Length = 136

 Score =  170 bits (431), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 84/120 (70%), Positives = 94/120 (78%), Gaps = 1/120 (0%)

Query: 31  NQVEVAPNNGAFHGDEKKPDFADALDHLDGTRYIERFSKYDDEYRRRLLEKYFSGK-ING 89
           NQVE A NNGA H D+KKP+F D LDHLD  + IERF KYDD+Y  RLL KYFS K  NG
Sbjct: 17  NQVEAATNNGASHVDDKKPNFTDGLDHLDSPQCIERFKKYDDDYAHRLLAKYFSNKNFNG 76

Query: 90  GNIIYEQITVRGEIIKTSRLPCLRSYADPVVGFEDQFSNGSSPPVDTQANIPNGKHMVKN 149
           GNI   +ITV  EIIK+S L C RSYADPVVGFE+Q SNGS+PP D+QANIPNGKH+VKN
Sbjct: 77  GNIFDLEITVNDEIIKSSSLTCYRSYADPVVGFEEQSSNGSTPPADSQANIPNGKHVVKN 136