Miyakogusa Predicted Gene
- Lj1g3v0546880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0546880.1 Non Chatacterized Hit- tr|I1KD08|I1KD08_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.56,0.00000000000007,no description,Zinc finger,
RING/FYVE/PHD-type; FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type;
seg,gene.g29788.t1.1
(402 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g32480.1 96 1e-19
Glyma06g22040.1 84 2e-16
Glyma12g01750.2 62 9e-10
Glyma01g44460.1 62 9e-10
Glyma11g01070.2 62 1e-09
Glyma11g01070.1 62 1e-09
Glyma11g11720.1 62 1e-09
Glyma12g01750.1 61 2e-09
Glyma17g16700.1 51 2e-06
>Glyma04g32480.1
Length = 218
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
Query: 286 TWRSIENLHSVFEFMNAEQSLLRTSIDGVELLVFTSSQLDKDSKVTEGYFLWGVFRHKKI 345
T RS +NL S+ +F+NAE+S+LR+ I+GVELLVFTS+QLD DSKV G+FLWG+FR KKI
Sbjct: 108 TERSRKNLDSILKFLNAEKSMLRSYINGVELLVFTSNQLDMDSKVNAGHFLWGMFRQKKI 167
Query: 346 NEADERLLLKMEPXXXXXXXXXXGGKELVGMIDWVR 381
++A ER + MEP GGK++V D VR
Sbjct: 168 DKAIER-VPDMEP--VDMDIDMIGGKDVVERADVVR 200
>Glyma06g22040.1
Length = 244
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 5/71 (7%)
Query: 286 TWRSIENLHSVFEFMNAEQSLLRTSIDGVELLVFTSSQLDKDSK-----VTEGYFLWGVF 340
T RS +NL S+ +FMNAE+S+LR+ I+GVELLVFTS+QLD DSK V +FLWG+F
Sbjct: 174 TERSRKNLDSILKFMNAEKSMLRSYINGVELLVFTSNQLDMDSKGAIAAVKTRHFLWGLF 233
Query: 341 RHKKINEADER 351
R KKI++A ER
Sbjct: 234 RQKKIDKAVER 244
>Glyma12g01750.2
Length = 1195
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQAKNGT 66
V+ + V+ C+ICGD G +++ +CS+C+ EH YCMR L +P+ DW CE C+ T
Sbjct: 182 VVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEET 241
Query: 67 TS 68
+
Sbjct: 242 AN 243
>Glyma01g44460.1
Length = 1418
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQ 61
V+ + V+ C+ICGD G +++ +CS+C+ EH YCMR L +P+ DW CE C+
Sbjct: 246 VVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECK 300
>Glyma11g01070.2
Length = 1450
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQ 61
V+ + V+ C+ICGD G +++ +CS+C+ EH YCMR L +P+ DW CE C+
Sbjct: 233 VVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECK 287
>Glyma11g01070.1
Length = 1450
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQ 61
V+ + V+ C+ICGD G +++ +CS+C+ EH YCMR L +P+ DW CE C+
Sbjct: 244 VVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECK 298
>Glyma11g11720.1
Length = 1445
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQAKNGT 66
V+ + V+ C+ICGD G +++ +CS+C+ EH YCMR L +P+ DW CE C+ T
Sbjct: 266 VVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEET 325
Query: 67 TS 68
+
Sbjct: 326 AN 327
>Glyma12g01750.1
Length = 1381
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 VIGNWVEPCNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPD-DWCCETCQAKNGT 66
V+ + V+ C+ICGD G +++ +CS+C+ EH YCMR L +P+ DW CE C+ T
Sbjct: 266 VVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEET 325
Query: 67 TS 68
+
Sbjct: 326 AN 327
>Glyma17g16700.1
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 16 CNICGDVGYAEVIVVCSKCNVTREHGYCMRICLTDIPDD--WCCETCQAKNGTTSP 69
C+ICGD G+ E + +C+KC EH YC L +PD W CE C+ G P
Sbjct: 25 CDICGDQGFEEYLAICNKCPDGAEHIYCNDEKLEKVPDGDWWTCEDCRKSPGNELP 80