Miyakogusa Predicted Gene
- Lj1g3v0526570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0526570.1 Non Chatacterized Hit- tr|F6GT55|F6GT55_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.01,2e-17,seg,NULL,CUFF.25953.1
(525 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g11100.1 238 1e-62
Glyma06g21190.1 185 9e-47
Glyma05g00820.1 145 2e-34
>Glyma17g11100.1
Length = 1312
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/276 (50%), Positives = 174/276 (63%), Gaps = 20/276 (7%)
Query: 4 QEGKGEYDSSRIHEDAVDDGSHKEVWKEYSDPHTSQDSVQDDGIHQHVGRADADISMIKD 63
+EGK EYDS HE+AVD +HKEVW++ SDPHT +D DD I + V + ++ I+ +KD
Sbjct: 310 EEGKTEYDSQAFHENAVDVETHKEVWRQESDPHTFEDCTPDDRIPKQVDKMNSGINAVKD 369
Query: 64 IIVDDVKYKLDPSVDFDSHGVKDITVDDGENKSTQTAATFDMMN-TMETKEVTMDRHDEL 122
I +DDV YK S+D D H VKDI VDDGE KST T DM+ +ETKEVTMD H EL
Sbjct: 370 ISIDDVHYKFGGSMDSDPHAVKDIAVDDGEMKSTSTTFVSDMVKPPLETKEVTMDVHPEL 429
Query: 123 AATQNKFDKDNNATKTELESEEMQLVHDHSRSESDKLLPSAEKNQLPSNSSSVGDAVAAK 182
A QN++D+D EL+S+ + D S +S KLLPS K Q SNS VGD +AAK
Sbjct: 430 AVMQNEYDEDK-----ELDSKAGHHMSDLSEQKSGKLLPSTAKKQPTSNSKPVGDTIAAK 484
Query: 183 QKTKXXXXXXXXXXXXXXXXXXXXXAKLAKPDVAPRWIPSNKGSYQDSLHVSYPPTRHNN 242
K K AK AKP+ RWIPSNKGSY +S+HV YPP+R+N+
Sbjct: 485 PKIK-------------QQDAHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNS 531
Query: 243 SPAALSNATSANEKMTDAKGKSASGSHVSRAMVSTD 278
+PAAL+N +S+ EKM DAK +S S VS A+VS D
Sbjct: 532 APAALTNFSSSKEKMEDAKTRSLSAPVVS-AVVSID 566
>Glyma06g21190.1
Length = 1075
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/287 (42%), Positives = 145/287 (50%), Gaps = 95/287 (33%)
Query: 1 MDIQEGKGEYDSSRIHEDAVDDGSHKEVWKEYSDPHTSQDSVQDDGIHQHVGRADADISM 60
+D QEGKG+YDS + +DDG +DGIHQ V
Sbjct: 326 IDAQEGKGDYDSPMV----LDDG--------------------NDGIHQQV--------- 352
Query: 61 IKDIIVDDVKYKLDPSVDFDSHGVKDITVDDGENKSTQTAATFDMMNTMETKEVTMDRHD 120
DDVKYKLD V D+H +KDI VD G T TKEV++D HD
Sbjct: 353 ------DDVKYKLDERVVSDTHALKDIGVDYGV--------------TFMTKEVSVDVHD 392
Query: 121 ELAATQNKFDKDNNATKTELESEEMQLVHDHSRSESDKLLPSAEKNQLPSNSSSVGDAVA 180
EL+ QNK D+DNN EK QLPS+S VGD V
Sbjct: 393 ELSGMQNKCDEDNN-----------------------------EKKQLPSSSKPVGDTVV 423
Query: 181 AKQKTKXXXXXXXXXXXXXXXXXXXXXAKLAKPDVAPRWIPSNKGSYQDSLHVSYPPTRH 240
KQKTK AK AKP+ RWIPSNKGSYQDS+HVSYPP+R+
Sbjct: 424 PKQKTK-------------EQEPHGFQAKQAKPNATTRWIPSNKGSYQDSMHVSYPPSRN 470
Query: 241 NNSPAALSNATSANEKMTDAKGKSASGSHVSRAMVSTDMTSAIMSEV 287
NNSPA LSN TSA EK+TDAKGKS SGS+VS +VS DM + + S +
Sbjct: 471 NNSPANLSNVTSAKEKITDAKGKSISGSYVSEVIVSMDMRNDLKSCI 517
>Glyma05g00820.1
Length = 1005
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 104/173 (60%), Gaps = 21/173 (12%)
Query: 1 MDIQEGKGEYDSSRIHEDAVDDGSHKEVWKEYSDPHTSQDSVQDDGIHQHVGRADADISM 60
+D QEGK E+DS HE+AVD +HKEVW++ SDPHT +D
Sbjct: 339 IDAQEGKTEFDSQVFHENAVDVETHKEVWRQESDPHTFED-------------------- 378
Query: 61 IKDIIVDDVKYKLDPSVDFDSHGVKDITVDDGENKSTQTAATFDMMNT-METKEVTMDRH 119
+KDI +DDV YK D S+D D H VKDI VDDGE KST T D M +ETKEV MD H
Sbjct: 379 LKDISIDDVHYKFDGSMDSDPHAVKDIAVDDGEIKSTSTTFISDTMKPPLETKEVNMDVH 438
Query: 120 DELAATQNKFDKDNNATKTELESEEMQLVHDHSRSESDKLLPSAEKNQLPSNS 172
ELA QN++D+D AT+ EL+S+ + D S +S KLL S K Q PSNS
Sbjct: 439 QELAVMQNEYDEDKEATEKELDSKAGHQMPDLSEQKSGKLLSSTAKKQPPSNS 491