Miyakogusa Predicted Gene

Lj1g3v0524400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0524400.1 tr|G7J8V5|G7J8V5_MEDTR 50S ribosomal protein L13
OS=Medicago truncatula GN=MTR_3g082760 PE=4
SV=1,75,0.00000001,rplM_bact: ribosomal protein L13,Ribosomal protein
L13, bacterial-type; RIBOSOMAL_L13,Ribosomal prot,CUFF.25940.1
         (198 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36450.1                                                       281   3e-76
Glyma19g22420.2                                                       277   6e-75
Glyma19g22420.1                                                       277   6e-75
Glyma15g32540.1                                                        88   5e-18
Glyma20g07500.1                                                        78   6e-15

>Glyma19g36450.1 
          Length = 200

 Score =  281 bits (719), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 141/200 (70%), Positives = 148/200 (74%), Gaps = 2/200 (1%)

Query: 1   MKMLTSFN--MKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTYAPN 58
           MKM+T+FN  MKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTY PN
Sbjct: 1   MKMVTAFNGNMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTYTPN 60

Query: 59  RDDGDMCIVLNAKDVCVTGRKFKDKVYYWHTGYVGGLKQRTLKEQMAKDPTEVIRKAILR 118
           RDDGDMCIVLNAKD+CVTGRK  DKVYYWHTGY+G LKQRTLK+QMAKDPTEVIRKA+LR
Sbjct: 61  RDDGDMCIVLNAKDICVTGRKLTDKVYYWHTGYIGHLKQRTLKDQMAKDPTEVIRKAVLR 120

Query: 119 MLPRNXXXXXXXXXXXIFPGSEHPFADRPLEQYEMPPXXXXXXXXXXXXXXXXXXXXXXX 178
           MLPRN           IFPGSEHPF DRPLE Y MPP                       
Sbjct: 121 MLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEPYVMPPRSVREMRPRARRAMIRAQKKAEQ 180

Query: 179 XXXXXDGTKGEKSEAQGESA 198
                DG KG+  EAQ ESA
Sbjct: 181 QQQKADGMKGKNGEAQEESA 200


>Glyma19g22420.2 
          Length = 201

 Score =  277 bits (708), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/201 (70%), Positives = 148/201 (73%), Gaps = 3/201 (1%)

Query: 1   MKMLTSF--NMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTYAPN 58
           MKM+T+F  NMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTY PN
Sbjct: 1   MKMVTAFTGNMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTYTPN 60

Query: 59  RDDGDMCIVLNAKDVCVTGRKFKDKVYYWHTGYVGGLKQRTLKEQMAKDPTEVIRKAILR 118
           RDDGDMCIVLNAKD+CVTGRK  DKVYYWHTGY+G LKQRTLK+QMAKDPTEVIRKA+LR
Sbjct: 61  RDDGDMCIVLNAKDICVTGRKLTDKVYYWHTGYIGHLKQRTLKDQMAKDPTEVIRKAVLR 120

Query: 119 MLPRNXXXXXXXXXXXIFPGSEHPFADRPLEQYEMPPXXXXXXXXXXXXXXXXXXXXXXX 178
           MLPRN           IFPGSEHPF DRPLE Y MPP                       
Sbjct: 121 MLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEPYVMPPRSVREMRPRARRAMIRAQKKAEQ 180

Query: 179 XXXXXDGT-KGEKSEAQGESA 198
                DG  KG+  EAQ ESA
Sbjct: 181 QQQKADGMKKGKNGEAQEESA 201


>Glyma19g22420.1 
          Length = 201

 Score =  277 bits (708), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 141/201 (70%), Positives = 148/201 (73%), Gaps = 3/201 (1%)

Query: 1   MKMLTSF--NMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTYAPN 58
           MKM+T+F  NMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTY PN
Sbjct: 1   MKMVTAFTGNMKKAAAGLRRINLDGLRWRVFDAKGQVLGRLASQIATVVQGKDKPTYTPN 60

Query: 59  RDDGDMCIVLNAKDVCVTGRKFKDKVYYWHTGYVGGLKQRTLKEQMAKDPTEVIRKAILR 118
           RDDGDMCIVLNAKD+CVTGRK  DKVYYWHTGY+G LKQRTLK+QMAKDPTEVIRKA+LR
Sbjct: 61  RDDGDMCIVLNAKDICVTGRKLTDKVYYWHTGYIGHLKQRTLKDQMAKDPTEVIRKAVLR 120

Query: 119 MLPRNXXXXXXXXXXXIFPGSEHPFADRPLEQYEMPPXXXXXXXXXXXXXXXXXXXXXXX 178
           MLPRN           IFPGSEHPF DRPLE Y MPP                       
Sbjct: 121 MLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEPYVMPPRSVREMRPRARRAMIRAQKKAEQ 180

Query: 179 XXXXXDGT-KGEKSEAQGESA 198
                DG  KG+  EAQ ESA
Sbjct: 181 QQQKADGMKKGKNGEAQEESA 201


>Glyma15g32540.1 
          Length = 243

 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 1/125 (0%)

Query: 26  WRVFDAKGQVLGRLASQIATVVQGKDKPTYAPNRDDGDMCIVLNAKDVCVTGRKFKDKVY 85
           W V DA  +VLGRLAS IA  ++GK+  TY P+ D G   IV+NA+ V V+G+K   K+Y
Sbjct: 107 WYVVDATDKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLY 166

Query: 86  YWHTGYVGGLKQRTLKEQMAKDPTEVIRKAILRMLPRNXXXXXXXXXXXIFPGSEHPF-A 144
             H+G  GG+   T  +   + P  +I  A+  MLP+            ++ G +HP  A
Sbjct: 167 RRHSGRPGGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPDHPHAA 226

Query: 145 DRPLE 149
            +P+E
Sbjct: 227 QKPVE 231


>Glyma20g07500.1 
          Length = 86

 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 38/52 (73%)

Query: 104 MAKDPTEVIRKAILRMLPRNXXXXXXXXXXXIFPGSEHPFADRPLEQYEMPP 155
           MAKDPTEVIRKA+LRMLPRN           IFPGSEHPF DRPLE Y MPP
Sbjct: 1   MAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEPYVMPP 52