Miyakogusa Predicted Gene

Lj1g3v0524360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0524360.1 Non Chatacterized Hit- tr|I3LBW5|I3LBW5_PIG
Uncharacterized protein OS=Sus scrofa GN=PIN4 PE=4
SV=1,44.52,4e-19,PPIC_PPIASE_2,Peptidyl-prolyl cis-trans isomerase,
PpiC-type; seg,NULL; FKBP-like,NULL; no descripti,CUFF.25939.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g33180.2                                                       222   9e-59
Glyma04g33180.1                                                       222   9e-59
Glyma06g21080.1                                                       221   2e-58
Glyma16g24140.1                                                        59   1e-09
Glyma02g05560.1                                                        59   2e-09
Glyma04g20880.1                                                        52   2e-07

>Glyma04g33180.2 
          Length = 146

 Score =  222 bits (566), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 108/124 (87%), Positives = 108/124 (87%)

Query: 22  SDENASXXXXXXXXXXXXXXTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAE 81
           SDENAS              TCTYVKARHILCEKQGKINEAYKKLQDGWL NGDKVPPAE
Sbjct: 23  SDENASKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLCNGDKVPPAE 82

Query: 82  FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTVVGATSAPFKSTHGYHIILSE 141
           FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNT VGATSAPFKSTHGYHIILSE
Sbjct: 83  FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGATSAPFKSTHGYHIILSE 142

Query: 142 GRKN 145
           GRKN
Sbjct: 143 GRKN 146


>Glyma04g33180.1 
          Length = 146

 Score =  222 bits (566), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 108/124 (87%), Positives = 108/124 (87%)

Query: 22  SDENASXXXXXXXXXXXXXXTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAE 81
           SDENAS              TCTYVKARHILCEKQGKINEAYKKLQDGWL NGDKVPPAE
Sbjct: 23  SDENASKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLCNGDKVPPAE 82

Query: 82  FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTVVGATSAPFKSTHGYHIILSE 141
           FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNT VGATSAPFKSTHGYHIILSE
Sbjct: 83  FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGATSAPFKSTHGYHIILSE 142

Query: 142 GRKN 145
           GRKN
Sbjct: 143 GRKN 146


>Glyma06g21080.1 
          Length = 188

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/124 (85%), Positives = 108/124 (87%)

Query: 22  SDENASXXXXXXXXXXXXXXTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAE 81
           SDENAS              TCTYVKARHILCEKQGKINEAYKKLQDGWL NGDKVPPAE
Sbjct: 65  SDENASKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLGNGDKVPPAE 124

Query: 82  FAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTVVGATSAPFKSTHGYHIILSE 141
           FAK+AQEYSECPSGKKGGDLGWFPRGKMAGPFQ+VAFNT VGATSAPFKSTHGYHIILSE
Sbjct: 125 FAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSE 184

Query: 142 GRKN 145
           GRKN
Sbjct: 185 GRKN 188


>Glyma16g24140.1 
          Length = 126

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 26/114 (22%)

Query: 46  VKARHILCEKQGKINEA---------------------YKKLQDGWLSNGDKVPPAEFAK 84
           V+A HIL + +G   +A                      K L+D  +S       A F  
Sbjct: 14  VRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSG-----KASFED 68

Query: 85  IAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTVVGATSAPFKSTHGYHII 138
           IA  +S+C S K+GGDLG F RG+M  PF++  F   VG  S    +  G HII
Sbjct: 69  IASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHII 122


>Glyma02g05560.1 
          Length = 126

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 26/114 (22%)

Query: 46  VKARHILCEKQGKINEA---------------------YKKLQDGWLSNGDKVPPAEFAK 84
           V+A HIL + +G   +A                      K L+D  +S       A F  
Sbjct: 14  VRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSG-----KATFED 68

Query: 85  IAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTVVGATSAPFKSTHGYHII 138
           IA  +S+C S K+GGDLG F RG+M  PF++  F   +G  S    +  G HII
Sbjct: 69  IASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKIGEISDIVDTDSGVHII 122


>Glyma04g20880.1 
          Length = 29

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 26/29 (89%)

Query: 48 ARHILCEKQGKINEAYKKLQDGWLSNGDK 76
          AR+ LCEKQGKINE YKKL+DGWLSN DK
Sbjct: 1  ARNALCEKQGKINEVYKKLRDGWLSNPDK 29