Miyakogusa Predicted Gene

Lj1g3v0453350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0453350.1 Non Chatacterized Hit- tr|B9R947|B9R947_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,72.22,0.0000000003,seg,NULL; coiled-coil,NULL,57807_g.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g20260.1                                                        55   1e-08

>Glyma06g20260.1 
          Length = 105

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 32/45 (71%)

Query: 58  PVKLRAKLGKLDSKMQALTAKREEILKLLQEVETKPSESNEPAVG 102
           P  L+ KL KLDSKMQAL  KREEILKLLQEVE   + SN P  G
Sbjct: 59  PAILKQKLEKLDSKMQALQTKREEILKLLQEVEQGAANSNPPPFG 103