Miyakogusa Predicted Gene

Lj1g3v0437870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0437870.1 Non Chatacterized Hit- tr|I1LIT7|I1LIT7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90,0,TRANSCRIPTION
INITIATION FACTOR IIIC (TFIIIC), POLYPEPTIDE 3-RELATED,NULL;
TPR-like,NULL; no descrip,CUFF.25879.1
         (320 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10840.1                                                       610   e-175
Glyma12g03130.1                                                       547   e-156

>Glyma11g10840.1 
          Length = 595

 Score =  610 bits (1573), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 290/320 (90%), Positives = 306/320 (95%)

Query: 1   MEKEKRKAEALASGVDWLSDDSDDEPQKENKEPPRYNLLKVEEHHQLIIDLCKALSSLRR 60
           +EKEKRKAEALASG+DWLSDDSDDEPQKEN+EPP  NLLK EEHHQLIIDLCKAL+SL+R
Sbjct: 276 IEKEKRKAEALASGIDWLSDDSDDEPQKENREPPLCNLLKDEEHHQLIIDLCKALASLQR 335

Query: 61  YGEALEIINLTLRLAHTSLSAEKKEELRSLGAQMAYNNTDPKHGFDCVKYIVQQYPHSVA 120
           Y EALEIINL LRLAHTSLS EKKEELRSLGAQMAYN TDPKHGFDCVKYIVQQ+PHSVA
Sbjct: 336 YWEALEIINLFLRLAHTSLSTEKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPHSVA 395

Query: 121 AWNCYYKVISRLENRDTRHYKFIRGMQGKFADCVPPILISGHQFTIFSHHQDAARKYLEA 180
           AWNCYYKVISRLENRDTRHYKF+RGMQGKF DCVPPILISGHQFTI SHHQDAARKYLEA
Sbjct: 396 AWNCYYKVISRLENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEA 455

Query: 181 YKLLPENPLVNLCVGTALINLALGLRLQNKHQCVLQGLAFLYNNLRICENSQESLYNIAR 240
           YKLLPENPLVNLCVGTALINLALGLRLQNKHQCV+QGLAFLYNNLRICENSQESLYNIAR
Sbjct: 456 YKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICENSQESLYNIAR 515

Query: 241 AFHHVGLVTLAALYYEKVIAICEKDYPIPKLPNEAPDVMENRKPGYCDLRREAAFNLHLI 300
           AFHHVGLVTLA +YYEKVIA+CE+DYPIPKLPNE  D++E  KPGYCDLRREAA+NLHLI
Sbjct: 516 AFHHVGLVTLAVIYYEKVIAMCERDYPIPKLPNENSDIIETHKPGYCDLRREAAYNLHLI 575

Query: 301 YKKSGALDLARQVLKDHCTL 320
           YKKSGALDLARQVL+D+CTL
Sbjct: 576 YKKSGALDLARQVLRDYCTL 595


>Glyma12g03130.1 
          Length = 877

 Score =  547 bits (1410), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/285 (90%), Positives = 269/285 (94%)

Query: 36  YNLLKVEEHHQLIIDLCKALSSLRRYGEALEIINLTLRLAHTSLSAEKKEELRSLGAQMA 95
           +   + EEHHQLIIDLCKAL+SL+RY EALEIINL+LRLAHTSLS EKKEELRSLGAQMA
Sbjct: 593 FQFKRYEEHHQLIIDLCKALASLQRYWEALEIINLSLRLAHTSLSTEKKEELRSLGAQMA 652

Query: 96  YNNTDPKHGFDCVKYIVQQYPHSVAAWNCYYKVISRLENRDTRHYKFIRGMQGKFADCVP 155
           YN TDPKHGFDCVKYIVQQ+PH VAAWNCYYKVISRLENRDTRHYKF+RGMQGKF DCVP
Sbjct: 653 YNTTDPKHGFDCVKYIVQQHPHGVAAWNCYYKVISRLENRDTRHYKFVRGMQGKFVDCVP 712

Query: 156 PILISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVL 215
           PILISGHQFTI SHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALG RLQNKHQCV+
Sbjct: 713 PILISGHQFTICSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCVV 772

Query: 216 QGLAFLYNNLRICENSQESLYNIARAFHHVGLVTLAALYYEKVIAICEKDYPIPKLPNEA 275
           QGLAFLYNN+RICENSQESLYNIARAFHHVGLVTLAA YYEKVIAICEKDYPIPKLPNE 
Sbjct: 773 QGLAFLYNNMRICENSQESLYNIARAFHHVGLVTLAAFYYEKVIAICEKDYPIPKLPNEN 832

Query: 276 PDVMENRKPGYCDLRREAAFNLHLIYKKSGALDLARQVLKDHCTL 320
           PD +E  KPGYCDLRREAA+NLHLIYKKSGALDLARQVLKDHCTL
Sbjct: 833 PDSIETHKPGYCDLRREAAYNLHLIYKKSGALDLARQVLKDHCTL 877