Miyakogusa Predicted Gene

Lj1g3v0426760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0426760.1 Non Chatacterized Hit- tr|I1K1J8|I1K1J8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,84.78,0,CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P,NULL;
P-loop containing nucleoside triphosphate hyd,CUFF.25895.1
         (370 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08830.2                                                       654   0.0  
Glyma05g08830.1                                                       654   0.0  
Glyma04g34690.1                                                       596   e-170
Glyma06g19970.1                                                       578   e-165
Glyma19g00340.1                                                       276   2e-74
Glyma03g16380.1                                                        78   1e-14
Glyma10g43930.1                                                        52   8e-07
Glyma20g38670.1                                                        51   2e-06

>Glyma05g08830.2 
          Length = 372

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/368 (85%), Positives = 343/368 (93%)

Query: 1   MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVA 60
           M SSPSPDIYIPEQWSEAA SIA SS PPI LICGAKN GKT FSRYLLNVLLH+Y++VA
Sbjct: 1   MDSSPSPDIYIPEQWSEAAESIAHSSMPPIALICGAKNCGKTTFSRYLLNVLLHKYTKVA 60

Query: 61  YLDTDVGQPEFTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVF 120
           YLDTDVGQPEFT PAFLSLTIVH+ TPD+T+PCLKTPERCLFFGDVSSKRDP++YL+YVF
Sbjct: 61  YLDTDVGQPEFTPPAFLSLTIVHKVTPDLTVPCLKTPERCLFFGDVSSKRDPSTYLSYVF 120

Query: 121 AIYDYYRKEYCSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKLSIS 180
           AIYDYY+K+YC  +K EN   + LPLIVNTPGWVKGVGY VLVDMLKYI PTHVVK+SI+
Sbjct: 121 AIYDYYQKKYCIYEKGENPCKVKLPLIVNTPGWVKGVGYDVLVDMLKYISPTHVVKISIA 180

Query: 181 SENKNLPAGQFWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYFRQCF 240
           SE KNLPAG+FWLDGEH+ TINLIEINSA QDSLNRS+LVQKDARLLRDLRIMAYF+QCF
Sbjct: 181 SEKKNLPAGEFWLDGEHDETINLIEINSAHQDSLNRSLLVQKDARLLRDLRIMAYFKQCF 240

Query: 241 PSDSDISTIKELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAVDSEG 300
            SDS+ISTIKELAH+LASHCPYEVPIASIKI+HLH EVPSSE+F+SLNA+IVGLAVDSEG
Sbjct: 241 SSDSNISTIKELAHALASHCPYEVPIASIKIRHLHCEVPSSEIFFSLNATIVGLAVDSEG 300

Query: 301 PENLPWCLGLGIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQVQGCISP 360
           PENLPWCLGLGIVRGIDT+KGVLYVITPVPH+SL+KVN+LLQGYIQIP CLLQVQGCISP
Sbjct: 301 PENLPWCLGLGIVRGIDTVKGVLYVITPVPHNSLEKVNVLLQGYIQIPSCLLQVQGCISP 360

Query: 361 YMSADVLT 368
           YMSA+ LT
Sbjct: 361 YMSANTLT 368


>Glyma05g08830.1 
          Length = 372

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/368 (85%), Positives = 343/368 (93%)

Query: 1   MGSSPSPDIYIPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVA 60
           M SSPSPDIYIPEQWSEAA SIA SS PPI LICGAKN GKT FSRYLLNVLLH+Y++VA
Sbjct: 1   MDSSPSPDIYIPEQWSEAAESIAHSSMPPIALICGAKNCGKTTFSRYLLNVLLHKYTKVA 60

Query: 61  YLDTDVGQPEFTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVF 120
           YLDTDVGQPEFT PAFLSLTIVH+ TPD+T+PCLKTPERCLFFGDVSSKRDP++YL+YVF
Sbjct: 61  YLDTDVGQPEFTPPAFLSLTIVHKVTPDLTVPCLKTPERCLFFGDVSSKRDPSTYLSYVF 120

Query: 121 AIYDYYRKEYCSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKLSIS 180
           AIYDYY+K+YC  +K EN   + LPLIVNTPGWVKGVGY VLVDMLKYI PTHVVK+SI+
Sbjct: 121 AIYDYYQKKYCIYEKGENPCKVKLPLIVNTPGWVKGVGYDVLVDMLKYISPTHVVKISIA 180

Query: 181 SENKNLPAGQFWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYFRQCF 240
           SE KNLPAG+FWLDGEH+ TINLIEINSA QDSLNRS+LVQKDARLLRDLRIMAYF+QCF
Sbjct: 181 SEKKNLPAGEFWLDGEHDETINLIEINSAHQDSLNRSLLVQKDARLLRDLRIMAYFKQCF 240

Query: 241 PSDSDISTIKELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAVDSEG 300
            SDS+ISTIKELAH+LASHCPYEVPIASIKI+HLH EVPSSE+F+SLNA+IVGLAVDSEG
Sbjct: 241 SSDSNISTIKELAHALASHCPYEVPIASIKIRHLHCEVPSSEIFFSLNATIVGLAVDSEG 300

Query: 301 PENLPWCLGLGIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQVQGCISP 360
           PENLPWCLGLGIVRGIDT+KGVLYVITPVPH+SL+KVN+LLQGYIQIP CLLQVQGCISP
Sbjct: 301 PENLPWCLGLGIVRGIDTVKGVLYVITPVPHNSLEKVNVLLQGYIQIPSCLLQVQGCISP 360

Query: 361 YMSADVLT 368
           YMSA+ LT
Sbjct: 361 YMSANTLT 368


>Glyma04g34690.1 
          Length = 347

 Score =  596 bits (1536), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 285/346 (82%), Positives = 317/346 (91%)

Query: 11  IPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPE 70
           IPEQW EA  SIA SS  PI LICGAKN GKT FSRYLLN+LL++Y++VAYLDTDVGQPE
Sbjct: 1   IPEQWLEATESIAHSSMLPIALICGAKNCGKTTFSRYLLNILLNKYTKVAYLDTDVGQPE 60

Query: 71  FTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVFAIYDYYRKEY 130
           FT PAFLSLTIVH+ TPD+T+PCLKTPERCLFFGDVS KRDP++YL+YVFAIY++YRKEY
Sbjct: 61  FTPPAFLSLTIVHKVTPDLTVPCLKTPERCLFFGDVSCKRDPSTYLSYVFAIYNHYRKEY 120

Query: 131 CSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKLSISSENKNLPAGQ 190
           C  DK E    I++PLIVNTPGWVKGVGY VLVDMLKYICPTHVVK+SISSE KNLPAG+
Sbjct: 121 CISDKGEYPHKIEVPLIVNTPGWVKGVGYDVLVDMLKYICPTHVVKISISSEKKNLPAGE 180

Query: 191 FWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYFRQCFPSDSDISTIK 250
           FW DGEH+ TIN+IEINSARQDSLNRSVLVQKDARLLRDLRIMAYFRQCF S+S+ISTIK
Sbjct: 181 FWSDGEHDETINIIEINSARQDSLNRSVLVQKDARLLRDLRIMAYFRQCFSSESNISTIK 240

Query: 251 ELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAVDSEGPENLPWCLGL 310
           ELAH+L SHCPYEVPIASIKI+HLH EVPSSE+FYSLNA++VGLAVDS+GPENLPWCLGL
Sbjct: 241 ELAHALTSHCPYEVPIASIKIRHLHCEVPSSEIFYSLNATVVGLAVDSDGPENLPWCLGL 300

Query: 311 GIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQVQG 356
           GIVRGID++KGVLYVITPVP+SSL+KVNLLLQGYIQIP CLLQ + 
Sbjct: 301 GIVRGIDSVKGVLYVITPVPNSSLEKVNLLLQGYIQIPSCLLQARN 346


>Glyma06g19970.1 
          Length = 340

 Score =  578 bits (1489), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 280/346 (80%), Positives = 308/346 (89%), Gaps = 7/346 (2%)

Query: 11  IPEQWSEAAGSIADSSTPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPE 70
           IPEQW EA  SIA+SS PPITLICGAKN  KT FSRYLLNVLL++Y++VAYLDTDVGQPE
Sbjct: 1   IPEQWLEATESIANSSMPPITLICGAKNCAKTTFSRYLLNVLLNKYTKVAYLDTDVGQPE 60

Query: 71  FTAPAFLSLTIVHQETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVFAIYDYYRKEY 130
           FT PAFLSLTIVH+ T D+T+PCLKTPERCLFFGDVS KRDP++YL+YVFAIY+YYRKEY
Sbjct: 61  FTPPAFLSLTIVHKVTSDLTVPCLKTPERCLFFGDVSCKRDPSTYLSYVFAIYNYYRKEY 120

Query: 131 CSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYICPTHVVKLSISSENKNLPAGQ 190
           C  DK E    I++PLIVNTPGWVK       VDMLKYICPTHVVK+SISSE KNLPAG+
Sbjct: 121 CISDKGEYPHKIEVPLIVNTPGWVK-------VDMLKYICPTHVVKISISSEKKNLPAGE 173

Query: 191 FWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDLRIMAYFRQCFPSDSDISTIK 250
           FW DGEH+ TINLIEINSA QDSL RSVLVQ DARLLRDLRI+ YF+QCF SDS+ISTIK
Sbjct: 174 FWSDGEHDETINLIEINSAHQDSLTRSVLVQIDARLLRDLRILTYFKQCFSSDSNISTIK 233

Query: 251 ELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFYSLNASIVGLAVDSEGPENLPWCLGL 310
           ELAH+LASHCPYEVPIASIKIQHLH EVPSSE+FYSLNA++VGLAVDS GPENLPWCLGL
Sbjct: 234 ELAHALASHCPYEVPIASIKIQHLHCEVPSSEIFYSLNATVVGLAVDSHGPENLPWCLGL 293

Query: 311 GIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYIQIPICLLQVQG 356
           GIVRGIDT+KGVLYVITPVPHSSL++VNLLLQGYIQIP CLLQ + 
Sbjct: 294 GIVRGIDTVKGVLYVITPVPHSSLERVNLLLQGYIQIPSCLLQARN 339


>Glyma19g00340.1 
          Length = 196

 Score =  276 bits (707), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 141/196 (71%), Positives = 160/196 (81%), Gaps = 17/196 (8%)

Query: 168 YICPTHVVKLSISSENKNLPAGQFWLDGEHNGTINLIEINSARQDSLNR--SVLVQKDAR 225
           Y  PTHVVK+SIS               +H+ TINLIEINSA Q+SLNR   VLVQKDAR
Sbjct: 15  YFSPTHVVKISIS---------------KHDETINLIEINSAHQNSLNRCNGVLVQKDAR 59

Query: 226 LLRDLRIMAYFRQCFPSDSDISTIKELAHSLASHCPYEVPIASIKIQHLHREVPSSEMFY 285
           LLRDLRIMAYF+QCF SDS+ISTIKELAH+LASHCPYEVPIASIKI+HLH EVPSSE+F+
Sbjct: 60  LLRDLRIMAYFKQCFSSDSNISTIKELAHALASHCPYEVPIASIKIRHLHCEVPSSEIFF 119

Query: 286 SLNASIVGLAVDSEGPENLPWCLGLGIVRGIDTIKGVLYVITPVPHSSLDKVNLLLQGYI 345
           SLNA+IVGLAVDSEGPENLP CLGLGIVRGID +K +LYVITPVPH+SL+KVN+LLQGYI
Sbjct: 120 SLNATIVGLAVDSEGPENLPSCLGLGIVRGIDIVKAMLYVITPVPHNSLEKVNVLLQGYI 179

Query: 346 QIPICLLQVQGCISPY 361
           QIP   +    C+  +
Sbjct: 180 QIPSSAIHNTRCLKNF 195


>Glyma03g16380.1 
          Length = 105

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 70/151 (46%), Gaps = 48/151 (31%)

Query: 111 DPTSYLNYVFAIYDYYRKEYCSLDKEENSPMIDLPLIVNTPGWVKGVGYSVLVDMLKYIC 170
           +P++ L+YVFAIY+YYRKEYC  DK E    I++PLI+NTPGWVK    S  V  L    
Sbjct: 1   EPSTCLSYVFAIYNYYRKEYCISDKGEYPHKIEVPLIMNTPGWVKRKLNSFSVVSLILFN 60

Query: 171 PTHVVKLSISSENKNLPAGQFWLDGEHNGTINLIEINSARQDSLNRSVLVQKDARLLRDL 230
           PT V+                           L+ +N      +N   LV          
Sbjct: 61  PTFVL---------------------------LLHVNYFFSKMINICHLV---------- 83

Query: 231 RIMAYFRQCFPSDSDISTIKELAHSLASHCP 261
                       DS+ISTIKELA +LASHCP
Sbjct: 84  -----------CDSNISTIKELAQALASHCP 103


>Glyma10g43930.1 
          Length = 432

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 6/143 (4%)

Query: 25  SSTPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPEFTAPAFLSLTIVHQ 84
           SS  P  ++ G  + GK+  SR LL+    +  +  ++D D+GQ   T P  ++ T +  
Sbjct: 117 SSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIEM 176

Query: 85  ETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVFAIYDYYRKEYCSLDKEENSPMIDL 144
               +    L+ P    F+G  +   +   Y   V  +     +++    +   S M   
Sbjct: 177 PIDPVEGIPLEMP-LVYFYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGM--- 232

Query: 145 PLIVNTPGWVKGVGYSVLVDMLK 167
             ++NT GW++GVGY +L+  ++
Sbjct: 233 --VINTMGWIEGVGYDLLLHAIR 253


>Glyma20g38670.1 
          Length = 438

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 6/143 (4%)

Query: 25  SSTPPITLICGAKNGGKTIFSRYLLNVLLHRYSRVAYLDTDVGQPEFTAPAFLSLTIVHQ 84
           SS  P  ++ G  + GK+  SR LL+    +  +  ++D D+GQ   T P  ++ T +  
Sbjct: 123 SSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIEM 182

Query: 85  ETPDITIPCLKTPERCLFFGDVSSKRDPTSYLNYVFAIYDYYRKEYCSLDKEENSPMIDL 144
               +    L+ P    ++G  +   +   Y   V  +     +++    +   S M   
Sbjct: 183 PIDPVEGIPLEMP-LVYYYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGM--- 238

Query: 145 PLIVNTPGWVKGVGYSVLVDMLK 167
             ++NT GW++GVGY +L+  ++
Sbjct: 239 --VINTMGWIEGVGYDLLLHAIR 259