Miyakogusa Predicted Gene

Lj1g3v0415850.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0415850.2 Non Chatacterized Hit- tr|C6T147|C6T147_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,57.14,0.000000006, ,CUFF.25795.2
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g28190.1                                                        65   2e-11
Glyma15g10880.3                                                        65   2e-11
Glyma15g10880.2                                                        65   2e-11
Glyma15g10880.1                                                        65   2e-11

>Glyma13g28190.1 
          Length = 336

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 32/49 (65%)

Query: 33 SQGSMSISELNWSQWLTTSSFAADKVFRFIAGSTASPFGHFVFSPLCFF 81
          S G  ++   NWSQW+   SFAADKVFR I G+TASP G FV SP  F 
Sbjct: 8  SNGDSNVQPANWSQWIPAGSFAADKVFRLIPGATASPIGQFVPSPATFL 56


>Glyma15g10880.3 
          Length = 380

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 33/49 (67%)

Query: 33  SQGSMSISELNWSQWLTTSSFAADKVFRFIAGSTASPFGHFVFSPLCFF 81
           S G  ++   NWS+W+   SFAADKVFR IAG+TASP G FV SP  F 
Sbjct: 53  SNGDSNVQAANWSKWIPEGSFAADKVFRLIAGATASPIGQFVASPTTFL 101


>Glyma15g10880.2 
          Length = 380

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 33/49 (67%)

Query: 33  SQGSMSISELNWSQWLTTSSFAADKVFRFIAGSTASPFGHFVFSPLCFF 81
           S G  ++   NWS+W+   SFAADKVFR IAG+TASP G FV SP  F 
Sbjct: 53  SNGDSNVQAANWSKWIPEGSFAADKVFRLIAGATASPIGQFVASPTTFL 101


>Glyma15g10880.1 
          Length = 380

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 33/49 (67%)

Query: 33  SQGSMSISELNWSQWLTTSSFAADKVFRFIAGSTASPFGHFVFSPLCFF 81
           S G  ++   NWS+W+   SFAADKVFR IAG+TASP G FV SP  F 
Sbjct: 53  SNGDSNVQAANWSKWIPEGSFAADKVFRLIAGATASPIGQFVASPTTFL 101