Miyakogusa Predicted Gene

Lj1g3v0415390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0415390.1 Non Chatacterized Hit- tr|Q9STT0|Q9STT0_ARATH
Putative uncharacterized protein T23J7.160 OS=Arabidop,68.75,8e-19,
,CUFF.25756.1
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g35050.1                                                       129   6e-31
Glyma06g19690.1                                                       129   1e-30
Glyma06g19690.2                                                       107   3e-24

>Glyma04g35050.1 
          Length = 95

 Score =  129 bits (325), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 70/94 (74%)

Query: 1  MAFLLNKTTIASHFRSQSQKTGDFTSLPRRQFHIEPGTRXXXXXXXXXXXXPFKSYKKSV 60
          MAF LN+T+IASHFRS SQKT D  S PRR+FH+EPG R            PFKSYKKSV
Sbjct: 1  MAFFLNQTSIASHFRSHSQKTEDLASFPRRRFHVEPGAREKALLAEDATLKPFKSYKKSV 60

Query: 61 KQLRRIGDVLTIVVVAGCCYEIYVKAVVKESQKQ 94
          K+LR+IG+ LTIVVVAGCCYE+YV+A  +E  ++
Sbjct: 61 KKLRKIGNALTIVVVAGCCYEVYVRAFTREEAQK 94


>Glyma06g19690.1 
          Length = 95

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 69/94 (73%)

Query: 1  MAFLLNKTTIASHFRSQSQKTGDFTSLPRRQFHIEPGTRXXXXXXXXXXXXPFKSYKKSV 60
          MAFL NKT+IASHFRS SQKT    S PRR+FH+EPG R            PFKSYKKSV
Sbjct: 1  MAFLWNKTSIASHFRSHSQKTEGLASFPRRRFHVEPGAREKALLAEDATLKPFKSYKKSV 60

Query: 61 KQLRRIGDVLTIVVVAGCCYEIYVKAVVKESQKQ 94
          KQLR+IG+ LT+VVVAGCCYE+YV+A  +E  ++
Sbjct: 61 KQLRKIGNALTVVVVAGCCYEVYVRAFTREEAQK 94


>Glyma06g19690.2 
          Length = 91

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 56/77 (72%)

Query: 1  MAFLLNKTTIASHFRSQSQKTGDFTSLPRRQFHIEPGTRXXXXXXXXXXXXPFKSYKKSV 60
          MAFL NKT+IASHFRS SQKT    S PRR+FH+EPG R            PFKSYKKSV
Sbjct: 1  MAFLWNKTSIASHFRSHSQKTEGLASFPRRRFHVEPGAREKALLAEDATLKPFKSYKKSV 60

Query: 61 KQLRRIGDVLTIVVVAG 77
          KQLR+IG+ LT+VVVAG
Sbjct: 61 KQLRKIGNALTVVVVAG 77