Miyakogusa Predicted Gene
- Lj1g3v0415000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0415000.1 Non Chatacterized Hit- tr|D7MMX4|D7MMX4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,47.29,5e-19,seg,NULL; NHL REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL,CUFF.25710.1
(151 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g35180.1 120 5e-28
Glyma06g19600.1 118 2e-27
Glyma17g09910.1 114 5e-26
Glyma05g02010.1 100 1e-21
Glyma13g22540.1 54 7e-08
Glyma15g24130.1 53 1e-07
Glyma09g12860.1 51 5e-07
Glyma17g11340.1 50 7e-07
>Glyma04g35180.1
Length = 178
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 82/148 (55%), Gaps = 18/148 (12%)
Query: 18 CCFGSRRSTTS----WWERVRATXXXXXXXXXXXHPTTWSAGDRWWS---RGFMRAREWS 70
CCFGSRR + + WWERVRAT P T S G RWWS R FM+ REWS
Sbjct: 35 CCFGSRRDSATLGFGWWERVRATSSWSESRSEA-QPVTGSPGGRWWSGGVRAFMKVREWS 93
Query: 71 EIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYDPLSYALNFDEGPGQNGDFEDDVVSDGF 130
E+ AGPRWKTFI AGKYQYDPLSYALNFDEG + D DG
Sbjct: 94 ELAAGPRWKTFIRRFSRSRSGGSRHAAGKYQYDPLSYALNFDEG---HNGDFGDDGYDGL 150
Query: 131 RNFSARYAMAPPLR-------QDVVVSG 151
RNFS RYA PP++ QDV V G
Sbjct: 151 RNFSTRYAAPPPIKSVSSDSNQDVAVLG 178
>Glyma06g19600.1
Length = 179
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 94/175 (53%), Gaps = 29/175 (16%)
Query: 3 ELDSTGNWQDTSNSL-----------CCFGSRRSTTS----WWERVRATXX-XXXXXXXX 46
E+D TG+ ++ SNSL CCFGSR + S WWERVRAT
Sbjct: 8 EIDLTGDGEERSNSLLANTRCSFCFPCCFGSRCHSVSVGFAWWERVRATSSWSETSPHSE 67
Query: 47 XHPTTWSAGDRWWS---RGFMRAREWSEIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYD 103
P T S+ WWS R FM+ REWSE+ AGPRWKTFI AGKYQYD
Sbjct: 68 AQPATGSSSGSWWSGGVRAFMKVREWSELAAGPRWKTFIRRFSRSRSGWARHAAGKYQYD 127
Query: 104 PLSYALNFDEGPGQNGDFEDDVVSDGFRNFSARYAMAPPLR-------QDVVVSG 151
PLSY+LNFDE G NG F+ D DG RNFSARYA PP + QD V G
Sbjct: 128 PLSYSLNFDE--GHNGYFDGDGY-DGLRNFSARYAAPPPFKPVSSDSIQDAAVLG 179
>Glyma17g09910.1
Length = 159
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 82/154 (53%), Gaps = 33/154 (21%)
Query: 3 ELDS------TGNWQDTSNSLC-------CFGSRRSTTSWWERVRATXXXXXXXXXXXHP 49
ELDS T QD SNS C C G RR + SWWERVR+ H
Sbjct: 4 ELDSESIPTPTAQAQDRSNSRCALLFSYSCLGPRRRS-SWWERVRS----------HSHS 52
Query: 50 TTWSAGDRWWSRGF---MRAREWSEIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYDPLS 106
T S GDRWWSRG + REWSEIVAGP+WKTFI YQYDP S
Sbjct: 53 TPASTGDRWWSRGLRALKKLREWSEIVAGPKWKTFIRRFNRNRPNK---RIPTYQYDPFS 109
Query: 107 YALNFDEGPGQNGDFEDDVVSDGFRNFSARYAMA 140
YALNFDEGP NGDF DD + RNFS RYA A
Sbjct: 110 YALNFDEGP--NGDFNDDDDA-ALRNFSTRYAAA 140
>Glyma05g02010.1
Length = 114
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 64/117 (54%), Gaps = 18/117 (15%)
Query: 27 TSWWERVRATXXXXXXXXXXXHPTTWSAGDRWWSRGF---MRAREWSEIVAGPRWKTFIX 83
+SWWERVR+ H SAGDRWWSRG + REWSEIVAGP+WKTFI
Sbjct: 2 SSWWERVRS----------HSHSAPASAGDRWWSRGLRALKKLREWSEIVAGPKWKTFIR 51
Query: 84 XXXXXXXXXXXXHAGKYQYDPLSYALNFDEGPGQNGDFEDDVVSDGFRNFSARYAMA 140
YQYDP SYALNFDEGP NGDF RNFS RYA A
Sbjct: 52 RFNRNRPNKR---IPTYQYDPFSYALNFDEGP--NGDFNHHHDDAALRNFSTRYAAA 103
>Glyma13g22540.1
Length = 141
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 55 GDRWWSRGFMRAREWSEIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYDPLSYALNFDEG 114
G+ W +A+E SE++AGP+WKTFI ++QYD SYALNF+ G
Sbjct: 57 GESWVVEKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKQQR-NRFQYDEHSYALNFNSG 115
Query: 115 PGQNGDFEDDVVSDGFRNFSARYAMAPPLRQD 146
ED+ + +FS+R+A AP RQ+
Sbjct: 116 A----QSEDEGMP---HSFSSRFA-APGRRQN 139
>Glyma15g24130.1
Length = 140
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 55 GDRWWSRGFMRAREWSEIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYDPLSYALNFDEG 114
G+ W S + +E+SE++AGP+WKTFI + ++QYD SYALNF+ G
Sbjct: 55 GNSWLSCKLRKIKEFSEVIAGPKWKTFIRKISGYGRKQQQKN--RFQYDEHSYALNFNSG 112
Query: 115 PGQNGDFEDDVVSDGFRNFSARYAMAPP 142
EDD D +FSAR++ P
Sbjct: 113 DKS----EDD---DTPPSFSARFSAPFP 133
>Glyma09g12860.1
Length = 144
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 55 GDRWWSRGFMRAREWSEIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYDPLSYALNFDEG 114
GD S + +E+SE++AGP+WKTFI ++QYD SYALNF+ G
Sbjct: 57 GDSRLSYKLRKIKEFSEVIAGPKWKTFI-RKISGYGRKQQQQKNRFQYDEHSYALNFNSG 115
Query: 115 PGQNGDFEDDVVSDGFRNFSARYAMAPP 142
EDD + +FSAR++ P
Sbjct: 116 ----AQSEDDDMPP---SFSARFSAPFP 136
>Glyma17g11340.1
Length = 140
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 55 GDRWWSRGFMRAREWSEIVAGPRWKTFIXXXXXXXXXXXXXHAGKYQYDPLSYALNFDEG 114
G+ W +A+E SE++AGP+WKTFI ++QYD SYALNF+
Sbjct: 56 GESWVVNKLRKAKEVSEVIAGPKWKTFIRKISGYGKKVKYQR-NRFQYDEHSYALNFN-- 112
Query: 115 PGQNGDFEDDVVSDGFRNFSARYAMAPPLRQD 146
ED+ + +FS+R+A AP RQ+
Sbjct: 113 --SEAQREDEGMPH---SFSSRFA-APGRRQN 138