Miyakogusa Predicted Gene

Lj1g3v0411510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0411510.1 Non Chatacterized Hit- tr|I1MB49|I1MB49_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.55,0.00000000001,
,NODE_94123_length_825_cov_38.450909.path2.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g36590.1                                                        74   4e-14
Glyma02g38490.1                                                        58   3e-09

>Glyma14g36590.1 
          Length = 313

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 2/55 (3%)

Query: 2   ALASFHGLEKQEQINNPHSHPVPFPTNY-SNPYVGGPSYPATAGPSYQPPRTHPP 55
           A ASFHG +KQ Q N PHSHPVPFP +Y +NPYVGGPSY A AGPSYQPPRT  P
Sbjct: 178 AQASFHGPQKQAQTNVPHSHPVPFPADYATNPYVGGPSY-APAGPSYQPPRTTTP 231


>Glyma02g38490.1 
          Length = 324

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 2/46 (4%)

Query: 4   ASFHGLEKQEQINNPHSHPVPFPTNY-SNPYVGGPSYPATAGPSYQ 48
            SFHG +KQ Q N P+SHPVPFP +Y ++PY+GGPSY A AGPSYQ
Sbjct: 178 GSFHGPQKQAQTNFPYSHPVPFPADYATDPYMGGPSY-APAGPSYQ 222